Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
RTL9Q8NET4 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RTL9Q8NET4 AC010460.3-201ENST00000511359 1579 ntBASIC22.15■■□□□ 1.14
RTL9Q8NET4 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
RTL9Q8NET4 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
RTL9Q8NET4 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
RTL9Q8NET4 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC22.15■■□□□ 1.14
RTL9Q8NET4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC22.15■■□□□ 1.14
RTL9Q8NET4 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.14
RTL9Q8NET4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
RTL9Q8NET4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC22.15■■□□□ 1.14
RTL9Q8NET4 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC22.15■■□□□ 1.14
RTL9Q8NET4 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC22.15■■□□□ 1.14
RTL9Q8NET4 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
RTL9Q8NET4 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
RTL9Q8NET4 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
RTL9Q8NET4 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
RTL9Q8NET4 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC22.14■■□□□ 1.14
RTL9Q8NET4 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
RTL9Q8NET4 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
RTL9Q8NET4 AC092865.5-201ENST00000545435 363 ntBASIC22.14■■□□□ 1.14
RTL9Q8NET4 AC025062.2-201ENST00000605477 670 ntBASIC22.14■■□□□ 1.14
RTL9Q8NET4 PRKN-208ENST00000610470 531 ntTSL 2 BASIC22.14■■□□□ 1.14
RTL9Q8NET4 PRKN-209ENST00000612485 225 ntTSL 5 BASIC22.14■■□□□ 1.14
RTL9Q8NET4 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
RTL9Q8NET4 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
RTL9Q8NET4 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
RTL9Q8NET4 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
RTL9Q8NET4 AL356309.3-201ENST00000624132 1934 ntBASIC22.14■■□□□ 1.13
RTL9Q8NET4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RTL9Q8NET4 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC22.14■■□□□ 1.13
RTL9Q8NET4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
RTL9Q8NET4 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RTL9Q8NET4 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC22.14■■□□□ 1.13
RTL9Q8NET4 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RTL9Q8NET4 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
RTL9Q8NET4 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
RTL9Q8NET4 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
RTL9Q8NET4 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC22.13■■□□□ 1.13
RTL9Q8NET4 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC22.13■■□□□ 1.13
RTL9Q8NET4 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC22.13■■□□□ 1.13
RTL9Q8NET4 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
RTL9Q8NET4 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC22.13■■□□□ 1.13
RTL9Q8NET4 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC22.13■■□□□ 1.13
RTL9Q8NET4 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC22.13■■□□□ 1.13
RTL9Q8NET4 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC22.13■■□□□ 1.13
RTL9Q8NET4 AC073592.4-201ENST00000623827 446 ntBASIC22.13■■□□□ 1.13
RTL9Q8NET4 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RTL9Q8NET4 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC22.13■■□□□ 1.13
RTL9Q8NET4 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC22.13■■□□□ 1.13
RTL9Q8NET4 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RTL9Q8NET4 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC22.13■■□□□ 1.13
RTL9Q8NET4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC22.13■■□□□ 1.13
RTL9Q8NET4 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC22.13■■□□□ 1.13
RTL9Q8NET4 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RTL9Q8NET4 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RTL9Q8NET4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC22.13■■□□□ 1.13
RTL9Q8NET4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
RTL9Q8NET4 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC22.13■■□□□ 1.13
RTL9Q8NET4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
RTL9Q8NET4 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTL9Q8NET4 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTL9Q8NET4 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC22.12■■□□□ 1.13
RTL9Q8NET4 SRP19-202ENST00000445150 833 ntTSL 2 BASIC22.12■■□□□ 1.13
RTL9Q8NET4 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
RTL9Q8NET4 RPL13AP23-201ENST00000480739 586 ntBASIC22.12■■□□□ 1.13
RTL9Q8NET4 AC093909.1-201ENST00000504731 1122 ntBASIC22.12■■□□□ 1.13
RTL9Q8NET4 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC22.12■■□□□ 1.13
RTL9Q8NET4 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC22.12■■□□□ 1.13
RTL9Q8NET4 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC22.12■■□□□ 1.13
RTL9Q8NET4 PNMT-203ENST00000581428 677 ntTSL 2 BASIC22.12■■□□□ 1.13
RTL9Q8NET4 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC22.12■■□□□ 1.13
RTL9Q8NET4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC22.12■■□□□ 1.13
RTL9Q8NET4 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTL9Q8NET4 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
RTL9Q8NET4 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTL9Q8NET4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC22.12■■□□□ 1.13
RTL9Q8NET4 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTL9Q8NET4 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
RTL9Q8NET4 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
RTL9Q8NET4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTL9Q8NET4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC22.12■■□□□ 1.13
RTL9Q8NET4 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTL9Q8NET4 TBC1D3P5-201ENST00000579401 1545 ntBASIC22.12■■□□□ 1.13
RTL9Q8NET4 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC22.12■■□□□ 1.13
RTL9Q8NET4 FABP5-202ENST00000396359 986 ntTSL 5 BASIC22.12■■□□□ 1.13
RTL9Q8NET4 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RTL9Q8NET4 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC22.12■■□□□ 1.13
RTL9Q8NET4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC22.12■■□□□ 1.13
RTL9Q8NET4 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC22.12■■□□□ 1.13
RTL9Q8NET4 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC22.12■■□□□ 1.13
RTL9Q8NET4 PIN1-206ENST00000587625 878 ntTSL 2 BASIC22.12■■□□□ 1.13
RTL9Q8NET4 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC22.12■■□□□ 1.13
RTL9Q8NET4 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RTL9Q8NET4 AD001527.2-201ENST00000622994 785 ntBASIC22.12■■□□□ 1.13
RTL9Q8NET4 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RTL9Q8NET4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTL9Q8NET4 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC22.11■■□□□ 1.13
RTL9Q8NET4 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RTL9Q8NET4 BX323043.1-201ENST00000641006 1765 ntBASIC22.11■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms