Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT78Q8N1N4 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT78Q8N1N4 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT78Q8N1N4 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
KRT78Q8N1N4 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KRT78Q8N1N4 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT78Q8N1N4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT78Q8N1N4 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT78Q8N1N4 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT78Q8N1N4 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT78Q8N1N4 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT78Q8N1N4 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.45■□□□□ 0.38
KRT78Q8N1N4 AL359075.1-203ENST00000462729 1002 ntBASIC17.45■□□□□ 0.38
KRT78Q8N1N4 AC113404.2-201ENST00000507884 177 ntBASIC17.45■□□□□ 0.38
KRT78Q8N1N4 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.45■□□□□ 0.38
KRT78Q8N1N4 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KRT78Q8N1N4 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
KRT78Q8N1N4 AC079602.3-201ENST00000623931 403 ntBASIC17.45■□□□□ 0.38
KRT78Q8N1N4 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.45■□□□□ 0.38
KRT78Q8N1N4 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
KRT78Q8N1N4 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT78Q8N1N4 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT78Q8N1N4 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT78Q8N1N4 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
KRT78Q8N1N4 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KRT78Q8N1N4 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT78Q8N1N4 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
KRT78Q8N1N4 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT78Q8N1N4 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT78Q8N1N4 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
KRT78Q8N1N4 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.45■□□□□ 0.38
KRT78Q8N1N4 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KRT78Q8N1N4 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
KRT78Q8N1N4 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
KRT78Q8N1N4 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
KRT78Q8N1N4 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT78Q8N1N4 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT78Q8N1N4 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT78Q8N1N4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT78Q8N1N4 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT78Q8N1N4 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.44■□□□□ 0.38
KRT78Q8N1N4 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT78Q8N1N4 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT78Q8N1N4 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
KRT78Q8N1N4 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT78Q8N1N4 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT78Q8N1N4 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT78Q8N1N4 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
KRT78Q8N1N4 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
KRT78Q8N1N4 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT78Q8N1N4 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.44■□□□□ 0.38
KRT78Q8N1N4 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.44■□□□□ 0.38
KRT78Q8N1N4 HLA-F-220ENST00000434407 884 ntBASIC17.44■□□□□ 0.38
KRT78Q8N1N4 KRT18P48-201ENST00000434763 852 ntBASIC17.44■□□□□ 0.38
KRT78Q8N1N4 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.44■□□□□ 0.38
KRT78Q8N1N4 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.44■□□□□ 0.38
KRT78Q8N1N4 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.44■□□□□ 0.38
KRT78Q8N1N4 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.44■□□□□ 0.38
KRT78Q8N1N4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
KRT78Q8N1N4 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT78Q8N1N4 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT78Q8N1N4 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
KRT78Q8N1N4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.44■□□□□ 0.38
KRT78Q8N1N4 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT78Q8N1N4 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
KRT78Q8N1N4 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT78Q8N1N4 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
KRT78Q8N1N4 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.44■□□□□ 0.38
KRT78Q8N1N4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.43■□□□□ 0.38
KRT78Q8N1N4 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
KRT78Q8N1N4 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT78Q8N1N4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT78Q8N1N4 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KRT78Q8N1N4 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT78Q8N1N4 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT78Q8N1N4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT78Q8N1N4 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KRT78Q8N1N4 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT78Q8N1N4 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.43■□□□□ 0.38
KRT78Q8N1N4 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KRT78Q8N1N4 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.43■□□□□ 0.38
KRT78Q8N1N4 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT78Q8N1N4 AC112907.2-201ENST00000448639 330 ntBASIC17.43■□□□□ 0.38
KRT78Q8N1N4 AC063952.2-201ENST00000498792 1227 ntBASIC17.43■□□□□ 0.38
KRT78Q8N1N4 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.43■□□□□ 0.38
KRT78Q8N1N4 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.43■□□□□ 0.38
KRT78Q8N1N4 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.43■□□□□ 0.38
KRT78Q8N1N4 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.43■□□□□ 0.38
KRT78Q8N1N4 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KRT78Q8N1N4 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KRT78Q8N1N4 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT78Q8N1N4 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KRT78Q8N1N4 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT78Q8N1N4 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
KRT78Q8N1N4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT78Q8N1N4 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
KRT78Q8N1N4 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT78Q8N1N4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT78Q8N1N4 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KRT78Q8N1N4 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms