Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
CCDC116Q8IYX3 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CCDC116Q8IYX3 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.05■□□□□ 0.32
CCDC116Q8IYX3 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC116Q8IYX3 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.05■□□□□ 0.32
CCDC116Q8IYX3 AC092597.1-201ENST00000487352 616 ntBASIC17.05■□□□□ 0.32
CCDC116Q8IYX3 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC116Q8IYX3 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC116Q8IYX3 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.05■□□□□ 0.32
CCDC116Q8IYX3 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC116Q8IYX3 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CCDC116Q8IYX3 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC116Q8IYX3 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC116Q8IYX3 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CCDC116Q8IYX3 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CCDC116Q8IYX3 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC116Q8IYX3 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CCDC116Q8IYX3 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC116Q8IYX3 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CCDC116Q8IYX3 AC067852.2-201ENST00000590513 2313 ntBASIC17.04■□□□□ 0.32
CCDC116Q8IYX3 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC116Q8IYX3 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CCDC116Q8IYX3 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC116Q8IYX3 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC116Q8IYX3 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC116Q8IYX3 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC116Q8IYX3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC116Q8IYX3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC116Q8IYX3 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC116Q8IYX3 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.04■□□□□ 0.32
CCDC116Q8IYX3 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC116Q8IYX3 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CCDC116Q8IYX3 KRT18P38-201ENST00000449496 1282 ntBASIC17.04■□□□□ 0.32
CCDC116Q8IYX3 AL359075.1-203ENST00000462729 1002 ntBASIC17.04■□□□□ 0.32
CCDC116Q8IYX3 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC116Q8IYX3 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC116Q8IYX3 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.04■□□□□ 0.32
CCDC116Q8IYX3 AC008687.5-201ENST00000593746 558 ntBASIC17.04■□□□□ 0.32
CCDC116Q8IYX3 AC024563.2-201ENST00000603282 481 ntBASIC17.04■□□□□ 0.32
CCDC116Q8IYX3 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC116Q8IYX3 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC116Q8IYX3 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC116Q8IYX3 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC116Q8IYX3 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC116Q8IYX3 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC116Q8IYX3 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC116Q8IYX3 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC116Q8IYX3 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC116Q8IYX3 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC116Q8IYX3 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC116Q8IYX3 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC116Q8IYX3 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC116Q8IYX3 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC116Q8IYX3 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC116Q8IYX3 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CCDC116Q8IYX3 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC116Q8IYX3 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC116Q8IYX3 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC116Q8IYX3 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC116Q8IYX3 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC116Q8IYX3 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC116Q8IYX3 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC116Q8IYX3 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC116Q8IYX3 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC116Q8IYX3 HOMER2P1-201ENST00000455653 964 ntBASIC17.03■□□□□ 0.32
CCDC116Q8IYX3 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.03■□□□□ 0.32
CCDC116Q8IYX3 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.03■□□□□ 0.32
CCDC116Q8IYX3 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC116Q8IYX3 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CCDC116Q8IYX3 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC116Q8IYX3 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC116Q8IYX3 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC116Q8IYX3 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC116Q8IYX3 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CCDC116Q8IYX3 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CCDC116Q8IYX3 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC116Q8IYX3 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC116Q8IYX3 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC116Q8IYX3 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC116Q8IYX3 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC116Q8IYX3 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
CCDC116Q8IYX3 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC116Q8IYX3 LINC00602-201ENST00000629776 2065 ntBASIC17.02■□□□□ 0.32
CCDC116Q8IYX3 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC116Q8IYX3 AC132938.6-201ENST00000623828 1655 ntBASIC17.02■□□□□ 0.32
CCDC116Q8IYX3 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC116Q8IYX3 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC116Q8IYX3 FAM8A6P-201ENST00000407496 1135 ntBASIC17.02■□□□□ 0.32
CCDC116Q8IYX3 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.02■□□□□ 0.32
CCDC116Q8IYX3 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.02■□□□□ 0.32
CCDC116Q8IYX3 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC116Q8IYX3 AC092647.4-201ENST00000457211 535 ntBASIC17.02■□□□□ 0.32
CCDC116Q8IYX3 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.02■□□□□ 0.32
CCDC116Q8IYX3 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.02■□□□□ 0.32
CCDC116Q8IYX3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC116Q8IYX3 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC116Q8IYX3 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CCDC116Q8IYX3 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.02■□□□□ 0.32
CCDC116Q8IYX3 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC116Q8IYX3 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms