Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.23■□□□□ 0.19
NHLRC1Q6VVB1 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.23■□□□□ 0.19
NHLRC1Q6VVB1 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NHLRC1Q6VVB1 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.23■□□□□ 0.19
NHLRC1Q6VVB1 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
NHLRC1Q6VVB1 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.23■□□□□ 0.19
NHLRC1Q6VVB1 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NHLRC1Q6VVB1 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
NHLRC1Q6VVB1 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NHLRC1Q6VVB1 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
NHLRC1Q6VVB1 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
NHLRC1Q6VVB1 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.23■□□□□ 0.19
NHLRC1Q6VVB1 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
NHLRC1Q6VVB1 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NHLRC1Q6VVB1 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
NHLRC1Q6VVB1 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
NHLRC1Q6VVB1 RNF152P1-201ENST00000397754 604 ntBASIC16.23■□□□□ 0.19
NHLRC1Q6VVB1 KRT18P38-201ENST00000449496 1282 ntBASIC16.23■□□□□ 0.19
NHLRC1Q6VVB1 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.23■□□□□ 0.19
NHLRC1Q6VVB1 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.23■□□□□ 0.19
NHLRC1Q6VVB1 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NHLRC1Q6VVB1 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.23■□□□□ 0.19
NHLRC1Q6VVB1 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.23■□□□□ 0.19
NHLRC1Q6VVB1 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NHLRC1Q6VVB1 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
NHLRC1Q6VVB1 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.23■□□□□ 0.19
NHLRC1Q6VVB1 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NHLRC1Q6VVB1 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
NHLRC1Q6VVB1 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
NHLRC1Q6VVB1 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
NHLRC1Q6VVB1 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NHLRC1Q6VVB1 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NHLRC1Q6VVB1 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
NHLRC1Q6VVB1 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.23■□□□□ 0.19
NHLRC1Q6VVB1 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NHLRC1Q6VVB1 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.23■□□□□ 0.19
NHLRC1Q6VVB1 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.23■□□□□ 0.19
NHLRC1Q6VVB1 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
NHLRC1Q6VVB1 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NHLRC1Q6VVB1 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NHLRC1Q6VVB1 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NHLRC1Q6VVB1 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NHLRC1Q6VVB1 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NHLRC1Q6VVB1 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
NHLRC1Q6VVB1 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NHLRC1Q6VVB1 AL391807.1-203ENST00000604392 2365 ntBASIC16.22■□□□□ 0.19
NHLRC1Q6VVB1 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.22■□□□□ 0.19
NHLRC1Q6VVB1 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NHLRC1Q6VVB1 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NHLRC1Q6VVB1 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NHLRC1Q6VVB1 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NHLRC1Q6VVB1 AC008764.6-201ENST00000595909 2069 ntBASIC16.22■□□□□ 0.19
NHLRC1Q6VVB1 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
NHLRC1Q6VVB1 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NHLRC1Q6VVB1 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.22■□□□□ 0.19
NHLRC1Q6VVB1 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.22■□□□□ 0.19
NHLRC1Q6VVB1 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NHLRC1Q6VVB1 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
NHLRC1Q6VVB1 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NHLRC1Q6VVB1 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.22■□□□□ 0.19
NHLRC1Q6VVB1 AC034232.1-201ENST00000506026 1064 ntBASIC16.22■□□□□ 0.19
NHLRC1Q6VVB1 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.22■□□□□ 0.19
NHLRC1Q6VVB1 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.22■□□□□ 0.19
NHLRC1Q6VVB1 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.22■□□□□ 0.19
NHLRC1Q6VVB1 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.22■□□□□ 0.19
NHLRC1Q6VVB1 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.22■□□□□ 0.19
NHLRC1Q6VVB1 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NHLRC1Q6VVB1 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
NHLRC1Q6VVB1 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NHLRC1Q6VVB1 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NHLRC1Q6VVB1 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NHLRC1Q6VVB1 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.22■□□□□ 0.19
NHLRC1Q6VVB1 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NHLRC1Q6VVB1 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NHLRC1Q6VVB1 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NHLRC1Q6VVB1 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.22■□□□□ 0.19
NHLRC1Q6VVB1 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.22■□□□□ 0.19
NHLRC1Q6VVB1 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.21■□□□□ 0.19
NHLRC1Q6VVB1 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
NHLRC1Q6VVB1 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
NHLRC1Q6VVB1 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NHLRC1Q6VVB1 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.21■□□□□ 0.19
NHLRC1Q6VVB1 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NHLRC1Q6VVB1 AC132938.6-201ENST00000623828 1655 ntBASIC16.21■□□□□ 0.19
NHLRC1Q6VVB1 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NHLRC1Q6VVB1 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NHLRC1Q6VVB1 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NHLRC1Q6VVB1 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NHLRC1Q6VVB1 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NHLRC1Q6VVB1 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NHLRC1Q6VVB1 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NHLRC1Q6VVB1 AC009053.2-201ENST00000563701 2365 ntBASIC16.21■□□□□ 0.19
NHLRC1Q6VVB1 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.21■□□□□ 0.19
NHLRC1Q6VVB1 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NHLRC1Q6VVB1 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
NHLRC1Q6VVB1 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NHLRC1Q6VVB1 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
NHLRC1Q6VVB1 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.21■□□□□ 0.19
NHLRC1Q6VVB1 FLJ13224-201ENST00000313737 1514 ntBASIC16.21■□□□□ 0.19
NHLRC1Q6VVB1 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms