Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
KCNIP4Q6PIL6 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
KCNIP4Q6PIL6 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
KCNIP4Q6PIL6 TERF1P5-201ENST00000477545 1207 ntBASIC14.03□□□□□ -0.16
KCNIP4Q6PIL6 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC14.03□□□□□ -0.16
KCNIP4Q6PIL6 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
KCNIP4Q6PIL6 AC087623.3-201ENST00000607047 1098 ntBASIC14.03□□□□□ -0.16
KCNIP4Q6PIL6 AC013268.1-206ENST00000638368 961 ntBASIC14.03□□□□□ -0.16
KCNIP4Q6PIL6 AC112229.1-201ENST00000639295 961 ntBASIC14.03□□□□□ -0.16
KCNIP4Q6PIL6 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
KCNIP4Q6PIL6 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KCNIP4Q6PIL6 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KCNIP4Q6PIL6 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
KCNIP4Q6PIL6 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KCNIP4Q6PIL6 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KCNIP4Q6PIL6 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC14.03□□□□□ -0.16
KCNIP4Q6PIL6 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KCNIP4Q6PIL6 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KCNIP4Q6PIL6 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
KCNIP4Q6PIL6 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.03□□□□□ -0.16
KCNIP4Q6PIL6 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.03□□□□□ -0.16
KCNIP4Q6PIL6 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
KCNIP4Q6PIL6 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
KCNIP4Q6PIL6 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
KCNIP4Q6PIL6 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
KCNIP4Q6PIL6 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
KCNIP4Q6PIL6 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
KCNIP4Q6PIL6 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
KCNIP4Q6PIL6 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.02□□□□□ -0.16
KCNIP4Q6PIL6 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
KCNIP4Q6PIL6 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
KCNIP4Q6PIL6 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
KCNIP4Q6PIL6 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
KCNIP4Q6PIL6 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
KCNIP4Q6PIL6 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
KCNIP4Q6PIL6 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
KCNIP4Q6PIL6 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
KCNIP4Q6PIL6 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
KCNIP4Q6PIL6 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
KCNIP4Q6PIL6 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
KCNIP4Q6PIL6 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
KCNIP4Q6PIL6 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
KCNIP4Q6PIL6 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC14.02□□□□□ -0.16
KCNIP4Q6PIL6 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
KCNIP4Q6PIL6 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC14.02□□□□□ -0.16
KCNIP4Q6PIL6 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
KCNIP4Q6PIL6 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
KCNIP4Q6PIL6 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
KCNIP4Q6PIL6 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC14.02□□□□□ -0.17
KCNIP4Q6PIL6 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC14.02□□□□□ -0.17
KCNIP4Q6PIL6 BRI3-207ENST00000539286 699 ntTSL 2 BASIC14.02□□□□□ -0.17
KCNIP4Q6PIL6 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
KCNIP4Q6PIL6 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
KCNIP4Q6PIL6 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
KCNIP4Q6PIL6 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.02□□□□□ -0.17
KCNIP4Q6PIL6 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
KCNIP4Q6PIL6 PCDHA1-201ENST00000378133 2726 ntBASIC14.02□□□□□ -0.17
KCNIP4Q6PIL6 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
KCNIP4Q6PIL6 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.02□□□□□ -0.17
KCNIP4Q6PIL6 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
KCNIP4Q6PIL6 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
KCNIP4Q6PIL6 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
KCNIP4Q6PIL6 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
KCNIP4Q6PIL6 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
KCNIP4Q6PIL6 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KCNIP4Q6PIL6 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KCNIP4Q6PIL6 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
KCNIP4Q6PIL6 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KCNIP4Q6PIL6 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
KCNIP4Q6PIL6 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KCNIP4Q6PIL6 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
KCNIP4Q6PIL6 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
KCNIP4Q6PIL6 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC14.01□□□□□ -0.17
KCNIP4Q6PIL6 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KCNIP4Q6PIL6 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC14.01□□□□□ -0.17
KCNIP4Q6PIL6 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
KCNIP4Q6PIL6 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KCNIP4Q6PIL6 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
KCNIP4Q6PIL6 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
KCNIP4Q6PIL6 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.01□□□□□ -0.17
KCNIP4Q6PIL6 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KCNIP4Q6PIL6 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KCNIP4Q6PIL6 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
KCNIP4Q6PIL6 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC14.01□□□□□ -0.17
KCNIP4Q6PIL6 BET1L-204ENST00000410108 637 ntTSL 3 BASIC14.01□□□□□ -0.17
KCNIP4Q6PIL6 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC14.01□□□□□ -0.17
KCNIP4Q6PIL6 AL162412.1-201ENST00000567129 965 ntBASIC14.01□□□□□ -0.17
KCNIP4Q6PIL6 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
KCNIP4Q6PIL6 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC14.01□□□□□ -0.17
KCNIP4Q6PIL6 BRWD1-AS2-201ENST00000603064 1028 ntBASIC14.01□□□□□ -0.17
KCNIP4Q6PIL6 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
KCNIP4Q6PIL6 AC010536.3-201ENST00000620306 533 ntBASIC14.01□□□□□ -0.17
KCNIP4Q6PIL6 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
KCNIP4Q6PIL6 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.01□□□□□ -0.17
KCNIP4Q6PIL6 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
KCNIP4Q6PIL6 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
KCNIP4Q6PIL6 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC14.01□□□□□ -0.17
KCNIP4Q6PIL6 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
KCNIP4Q6PIL6 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KCNIP4Q6PIL6 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms