Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
LPCAT4Q643R3 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LPCAT4Q643R3 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LPCAT4Q643R3 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
LPCAT4Q643R3 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.05■□□□□ 0.32
LPCAT4Q643R3 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
LPCAT4Q643R3 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LPCAT4Q643R3 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LPCAT4Q643R3 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LPCAT4Q643R3 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
LPCAT4Q643R3 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
LPCAT4Q643R3 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.04■□□□□ 0.32
LPCAT4Q643R3 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LPCAT4Q643R3 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LPCAT4Q643R3 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.04■□□□□ 0.32
LPCAT4Q643R3 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LPCAT4Q643R3 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
LPCAT4Q643R3 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LPCAT4Q643R3 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.04■□□□□ 0.32
LPCAT4Q643R3 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
LPCAT4Q643R3 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
LPCAT4Q643R3 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LPCAT4Q643R3 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
LPCAT4Q643R3 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LPCAT4Q643R3 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
LPCAT4Q643R3 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.04■□□□□ 0.32
LPCAT4Q643R3 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
LPCAT4Q643R3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LPCAT4Q643R3 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LPCAT4Q643R3 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LPCAT4Q643R3 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LPCAT4Q643R3 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LPCAT4Q643R3 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
LPCAT4Q643R3 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
LPCAT4Q643R3 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LPCAT4Q643R3 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.04■□□□□ 0.32
LPCAT4Q643R3 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LPCAT4Q643R3 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LPCAT4Q643R3 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LPCAT4Q643R3 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LPCAT4Q643R3 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.04■□□□□ 0.32
LPCAT4Q643R3 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.04■□□□□ 0.32
LPCAT4Q643R3 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
LPCAT4Q643R3 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LPCAT4Q643R3 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LPCAT4Q643R3 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LPCAT4Q643R3 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LPCAT4Q643R3 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
LPCAT4Q643R3 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.03■□□□□ 0.32
LPCAT4Q643R3 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LPCAT4Q643R3 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
LPCAT4Q643R3 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LPCAT4Q643R3 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.03■□□□□ 0.32
LPCAT4Q643R3 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LPCAT4Q643R3 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LPCAT4Q643R3 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.03■□□□□ 0.32
LPCAT4Q643R3 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LPCAT4Q643R3 KRT18P5-201ENST00000436075 1291 ntBASIC17.03■□□□□ 0.32
LPCAT4Q643R3 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LPCAT4Q643R3 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.03■□□□□ 0.32
LPCAT4Q643R3 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LPCAT4Q643R3 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LPCAT4Q643R3 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LPCAT4Q643R3 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
LPCAT4Q643R3 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LPCAT4Q643R3 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.03■□□□□ 0.32
LPCAT4Q643R3 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
LPCAT4Q643R3 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LPCAT4Q643R3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LPCAT4Q643R3 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.03■□□□□ 0.32
LPCAT4Q643R3 AC068418.2-201ENST00000577309 3703 ntBASIC17.03■□□□□ 0.32
LPCAT4Q643R3 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LPCAT4Q643R3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LPCAT4Q643R3 AC103702.1-201ENST00000548801 2630 ntBASIC17.02■□□□□ 0.32
LPCAT4Q643R3 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LPCAT4Q643R3 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LPCAT4Q643R3 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LPCAT4Q643R3 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LPCAT4Q643R3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
LPCAT4Q643R3 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LPCAT4Q643R3 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LPCAT4Q643R3 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.02■□□□□ 0.32
LPCAT4Q643R3 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LPCAT4Q643R3 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.02■□□□□ 0.32
LPCAT4Q643R3 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LPCAT4Q643R3 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LPCAT4Q643R3 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LPCAT4Q643R3 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
LPCAT4Q643R3 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LPCAT4Q643R3 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LPCAT4Q643R3 KRT8P11-201ENST00000409686 1436 ntBASIC17.02■□□□□ 0.31
LPCAT4Q643R3 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.02■□□□□ 0.31
LPCAT4Q643R3 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
LPCAT4Q643R3 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LPCAT4Q643R3 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.02■□□□□ 0.31
LPCAT4Q643R3 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LPCAT4Q643R3 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
LPCAT4Q643R3 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.02■□□□□ 0.31
LPCAT4Q643R3 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LPCAT4Q643R3 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms