Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KHDC1Q4VXA5 KRT8P7-201ENST00000533003 1432 ntBASIC18.32■□□□□ 0.52
KHDC1Q4VXA5 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KHDC1Q4VXA5 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
KHDC1Q4VXA5 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KHDC1Q4VXA5 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.31■□□□□ 0.52
KHDC1Q4VXA5 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.31■□□□□ 0.52
KHDC1Q4VXA5 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.31■□□□□ 0.52
KHDC1Q4VXA5 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
KHDC1Q4VXA5 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KHDC1Q4VXA5 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KHDC1Q4VXA5 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.31■□□□□ 0.52
KHDC1Q4VXA5 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.31■□□□□ 0.52
KHDC1Q4VXA5 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.31■□□□□ 0.52
KHDC1Q4VXA5 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.31■□□□□ 0.52
KHDC1Q4VXA5 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
KHDC1Q4VXA5 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
KHDC1Q4VXA5 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KHDC1Q4VXA5 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.31■□□□□ 0.52
KHDC1Q4VXA5 AL157888.1-201ENST00000631930 593 ntBASIC18.31■□□□□ 0.52
KHDC1Q4VXA5 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
KHDC1Q4VXA5 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KHDC1Q4VXA5 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KHDC1Q4VXA5 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
KHDC1Q4VXA5 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
KHDC1Q4VXA5 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KHDC1Q4VXA5 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.31■□□□□ 0.52
KHDC1Q4VXA5 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.31■□□□□ 0.52
KHDC1Q4VXA5 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
KHDC1Q4VXA5 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KHDC1Q4VXA5 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
KHDC1Q4VXA5 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.3■□□□□ 0.52
KHDC1Q4VXA5 AL162741.1-201ENST00000565563 1558 ntBASIC18.3■□□□□ 0.52
KHDC1Q4VXA5 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
KHDC1Q4VXA5 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
KHDC1Q4VXA5 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KHDC1Q4VXA5 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
KHDC1Q4VXA5 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KHDC1Q4VXA5 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.3■□□□□ 0.52
KHDC1Q4VXA5 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.3■□□□□ 0.52
KHDC1Q4VXA5 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.3■□□□□ 0.52
KHDC1Q4VXA5 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.3■□□□□ 0.52
KHDC1Q4VXA5 KRT18P35-201ENST00000510488 1269 ntBASIC18.3■□□□□ 0.52
KHDC1Q4VXA5 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KHDC1Q4VXA5 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.3■□□□□ 0.52
KHDC1Q4VXA5 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.3■□□□□ 0.52
KHDC1Q4VXA5 AL445228.2-201ENST00000605589 952 ntBASIC18.3■□□□□ 0.52
KHDC1Q4VXA5 AC010240.3-201ENST00000607688 395 ntBASIC18.3■□□□□ 0.52
KHDC1Q4VXA5 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.3■□□□□ 0.52
KHDC1Q4VXA5 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
KHDC1Q4VXA5 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
KHDC1Q4VXA5 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.3■□□□□ 0.52
KHDC1Q4VXA5 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.3■□□□□ 0.52
KHDC1Q4VXA5 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KHDC1Q4VXA5 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
KHDC1Q4VXA5 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KHDC1Q4VXA5 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KHDC1Q4VXA5 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.3■□□□□ 0.52
KHDC1Q4VXA5 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KHDC1Q4VXA5 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.29■□□□□ 0.52
KHDC1Q4VXA5 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KHDC1Q4VXA5 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.29■□□□□ 0.52
KHDC1Q4VXA5 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
KHDC1Q4VXA5 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KHDC1Q4VXA5 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
KHDC1Q4VXA5 GNAS-203ENST00000306120 1878 ntBASIC18.29■□□□□ 0.52
KHDC1Q4VXA5 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KHDC1Q4VXA5 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KHDC1Q4VXA5 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KHDC1Q4VXA5 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
KHDC1Q4VXA5 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
KHDC1Q4VXA5 STARP1-201ENST00000397973 869 ntBASIC18.29■□□□□ 0.52
KHDC1Q4VXA5 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KHDC1Q4VXA5 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.29■□□□□ 0.52
KHDC1Q4VXA5 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.29■□□□□ 0.52
KHDC1Q4VXA5 AC092647.4-201ENST00000457211 535 ntBASIC18.29■□□□□ 0.52
KHDC1Q4VXA5 RASA4DP-201ENST00000460726 1199 ntBASIC18.29■□□□□ 0.52
KHDC1Q4VXA5 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.29■□□□□ 0.52
KHDC1Q4VXA5 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.29■□□□□ 0.52
KHDC1Q4VXA5 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.29■□□□□ 0.52
KHDC1Q4VXA5 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.29■□□□□ 0.52
KHDC1Q4VXA5 MIR3917-201ENST00000580971 93 ntBASIC18.29■□□□□ 0.52
KHDC1Q4VXA5 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.29■□□□□ 0.52
KHDC1Q4VXA5 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
KHDC1Q4VXA5 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
KHDC1Q4VXA5 MYC-208ENST00000641036 567 ntBASIC18.29■□□□□ 0.52
KHDC1Q4VXA5 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KHDC1Q4VXA5 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
KHDC1Q4VXA5 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
KHDC1Q4VXA5 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.29■□□□□ 0.52
KHDC1Q4VXA5 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KHDC1Q4VXA5 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.29■□□□□ 0.52
KHDC1Q4VXA5 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
KHDC1Q4VXA5 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KHDC1Q4VXA5 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KHDC1Q4VXA5 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
KHDC1Q4VXA5 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
KHDC1Q4VXA5 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KHDC1Q4VXA5 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
KHDC1Q4VXA5 AC090340.1-201ENST00000620778 4980 ntBASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms