Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC21.06■□□□□ 0.96
CERKLQ49MI3 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CERKLQ49MI3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.06■□□□□ 0.96
CERKLQ49MI3 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC21.06■□□□□ 0.96
CERKLQ49MI3 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CERKLQ49MI3 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CERKLQ49MI3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CERKLQ49MI3 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CERKLQ49MI3 CTNS-203ENST00000399306 803 ntTSL 3 BASIC21.06■□□□□ 0.96
CERKLQ49MI3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CERKLQ49MI3 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CERKLQ49MI3 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC21.06■□□□□ 0.96
CERKLQ49MI3 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC21.06■□□□□ 0.96
CERKLQ49MI3 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC21.06■□□□□ 0.96
CERKLQ49MI3 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC21.06■□□□□ 0.96
CERKLQ49MI3 ABBA01031661.1-201ENST00000634362 1253 ntBASIC21.06■□□□□ 0.96
CERKLQ49MI3 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CERKLQ49MI3 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CERKLQ49MI3 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
CERKLQ49MI3 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CERKLQ49MI3 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
CERKLQ49MI3 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC21.06■□□□□ 0.96
CERKLQ49MI3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CERKLQ49MI3 IL9RP2-201ENST00000423948 1312 ntBASIC21.05■□□□□ 0.96
CERKLQ49MI3 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CERKLQ49MI3 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC21.05■□□□□ 0.96
CERKLQ49MI3 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC21.05■□□□□ 0.96
CERKLQ49MI3 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CERKLQ49MI3 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC21.05■□□□□ 0.96
CERKLQ49MI3 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CERKLQ49MI3 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC21.05■□□□□ 0.96
CERKLQ49MI3 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CERKLQ49MI3 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
CERKLQ49MI3 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CERKLQ49MI3 FAM220CP-201ENST00000395253 831 ntBASIC21.05■□□□□ 0.96
CERKLQ49MI3 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CERKLQ49MI3 AC007967.3-201ENST00000434308 558 ntBASIC21.05■□□□□ 0.96
CERKLQ49MI3 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC21.05■□□□□ 0.96
CERKLQ49MI3 NME4-212ENST00000621774 904 ntTSL 3 BASIC21.05■□□□□ 0.96
CERKLQ49MI3 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC21.05■□□□□ 0.96
CERKLQ49MI3 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC21.05■□□□□ 0.96
CERKLQ49MI3 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CERKLQ49MI3 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CERKLQ49MI3 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CERKLQ49MI3 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CERKLQ49MI3 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CERKLQ49MI3 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CERKLQ49MI3 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CERKLQ49MI3 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CERKLQ49MI3 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC21.04■□□□□ 0.96
CERKLQ49MI3 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CERKLQ49MI3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CERKLQ49MI3 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC21.04■□□□□ 0.96
CERKLQ49MI3 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CERKLQ49MI3 CD9-202ENST00000382515 1229 ntTSL 5 BASIC21.04■□□□□ 0.96
CERKLQ49MI3 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC21.04■□□□□ 0.96
CERKLQ49MI3 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC21.04■□□□□ 0.96
CERKLQ49MI3 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC21.04■□□□□ 0.96
CERKLQ49MI3 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC21.04■□□□□ 0.96
CERKLQ49MI3 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC21.04■□□□□ 0.96
CERKLQ49MI3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC21.04■□□□□ 0.96
CERKLQ49MI3 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC21.04■□□□□ 0.96
CERKLQ49MI3 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC21.04■□□□□ 0.96
CERKLQ49MI3 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC21.04■□□□□ 0.96
CERKLQ49MI3 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CERKLQ49MI3 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CERKLQ49MI3 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CERKLQ49MI3 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CERKLQ49MI3 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CERKLQ49MI3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CERKLQ49MI3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CERKLQ49MI3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.04■□□□□ 0.96
CERKLQ49MI3 SP100-208ENST00000427101 1922 ntTSL 2 BASIC21.04■□□□□ 0.96
CERKLQ49MI3 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.03■□□□□ 0.96
CERKLQ49MI3 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.03■□□□□ 0.96
CERKLQ49MI3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CERKLQ49MI3 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CERKLQ49MI3 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CERKLQ49MI3 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CERKLQ49MI3 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CERKLQ49MI3 HNRNPDP1-201ENST00000439535 754 ntBASIC21.03■□□□□ 0.96
CERKLQ49MI3 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC21.03■□□□□ 0.96
CERKLQ49MI3 AC093909.1-201ENST00000504731 1122 ntBASIC21.03■□□□□ 0.96
CERKLQ49MI3 SART3-203ENST00000546611 1184 ntBASIC21.03■□□□□ 0.96
CERKLQ49MI3 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC21.03■□□□□ 0.96
CERKLQ49MI3 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CERKLQ49MI3 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC21.03■□□□□ 0.96
CERKLQ49MI3 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CERKLQ49MI3 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC21.03■□□□□ 0.96
CERKLQ49MI3 AL049840.3-201ENST00000602669 611 ntBASIC21.03■□□□□ 0.96
CERKLQ49MI3 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC21.03■□□□□ 0.96
CERKLQ49MI3 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC21.03■□□□□ 0.96
CERKLQ49MI3 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CERKLQ49MI3 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC21.03■□□□□ 0.96
CERKLQ49MI3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CERKLQ49MI3 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CERKLQ49MI3 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CERKLQ49MI3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CERKLQ49MI3 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC21.03■□□□□ 0.96
CERKLQ49MI3 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms