Protein–RNA interactions for Protein: Q04323

UBXN1, UBX domain-containing protein 1, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1Q04323 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.8■□□□□ 0.76
UBXN1Q04323 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.8■□□□□ 0.76
UBXN1Q04323 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.8■□□□□ 0.76
UBXN1Q04323 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.8■□□□□ 0.76
UBXN1Q04323 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBXN1Q04323 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
UBXN1Q04323 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.8■□□□□ 0.76
UBXN1Q04323 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.8■□□□□ 0.76
UBXN1Q04323 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
UBXN1Q04323 AC108860.2-201ENST00000562760 2183 ntBASIC19.8■□□□□ 0.76
UBXN1Q04323 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBXN1Q04323 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBXN1Q04323 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.8■□□□□ 0.76
UBXN1Q04323 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UBXN1Q04323 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
UBXN1Q04323 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBXN1Q04323 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.79■□□□□ 0.76
UBXN1Q04323 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBXN1Q04323 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UBXN1Q04323 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UBXN1Q04323 AC141586.5-201ENST00000624546 2050 ntBASIC19.79■□□□□ 0.76
UBXN1Q04323 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.79■□□□□ 0.76
UBXN1Q04323 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.79■□□□□ 0.76
UBXN1Q04323 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UBXN1Q04323 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBXN1Q04323 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBXN1Q04323 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UBXN1Q04323 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.79■□□□□ 0.76
UBXN1Q04323 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UBXN1Q04323 MIR1238-201ENST00000408483 83 ntBASIC19.79■□□□□ 0.76
UBXN1Q04323 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.79■□□□□ 0.76
UBXN1Q04323 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
UBXN1Q04323 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.79■□□□□ 0.76
UBXN1Q04323 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.79■□□□□ 0.76
UBXN1Q04323 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.79■□□□□ 0.76
UBXN1Q04323 MIR4785-201ENST00000585005 73 ntBASIC19.79■□□□□ 0.76
UBXN1Q04323 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBXN1Q04323 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBXN1Q04323 AC010240.3-201ENST00000607688 395 ntBASIC19.79■□□□□ 0.76
UBXN1Q04323 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBXN1Q04323 AC106820.2-201ENST00000563775 3264 ntBASIC19.79■□□□□ 0.76
UBXN1Q04323 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBXN1Q04323 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBXN1Q04323 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBXN1Q04323 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBXN1Q04323 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
UBXN1Q04323 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
UBXN1Q04323 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
UBXN1Q04323 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.78■□□□□ 0.76
UBXN1Q04323 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
UBXN1Q04323 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UBXN1Q04323 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
UBXN1Q04323 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UBXN1Q04323 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UBXN1Q04323 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
UBXN1Q04323 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.78■□□□□ 0.76
UBXN1Q04323 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.78■□□□□ 0.76
UBXN1Q04323 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.78■□□□□ 0.76
UBXN1Q04323 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.78■□□□□ 0.76
UBXN1Q04323 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UBXN1Q04323 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
UBXN1Q04323 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UBXN1Q04323 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.78■□□□□ 0.76
UBXN1Q04323 AC008550.1-201ENST00000511500 884 ntBASIC19.78■□□□□ 0.76
UBXN1Q04323 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
UBXN1Q04323 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UBXN1Q04323 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.78■□□□□ 0.76
UBXN1Q04323 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.78■□□□□ 0.76
UBXN1Q04323 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
UBXN1Q04323 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.78■□□□□ 0.76
UBXN1Q04323 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBXN1Q04323 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.78■□□□□ 0.76
UBXN1Q04323 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBXN1Q04323 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.78■□□□□ 0.76
UBXN1Q04323 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
UBXN1Q04323 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UBXN1Q04323 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.78■□□□□ 0.76
UBXN1Q04323 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBXN1Q04323 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBXN1Q04323 SIRPAP1-201ENST00000448467 1770 ntBASIC19.78■□□□□ 0.76
UBXN1Q04323 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBXN1Q04323 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UBXN1Q04323 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UBXN1Q04323 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UBXN1Q04323 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.77■□□□□ 0.76
UBXN1Q04323 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBXN1Q04323 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBXN1Q04323 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.77■□□□□ 0.76
UBXN1Q04323 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.77■□□□□ 0.76
UBXN1Q04323 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.77■□□□□ 0.76
UBXN1Q04323 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
UBXN1Q04323 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.77■□□□□ 0.76
UBXN1Q04323 C2orf69P3-201ENST00000565542 1120 ntBASIC19.77■□□□□ 0.76
UBXN1Q04323 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.77■□□□□ 0.76
UBXN1Q04323 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.77■□□□□ 0.76
UBXN1Q04323 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
UBXN1Q04323 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.77■□□□□ 0.76
UBXN1Q04323 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UBXN1Q04323 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.77■□□□□ 0.75
UBXN1Q04323 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms