Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
H3F3AP84243 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
H3F3AP84243 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
H3F3AP84243 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
H3F3AP84243 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
H3F3AP84243 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
H3F3AP84243 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
H3F3AP84243 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
H3F3AP84243 ARMC10P1-201ENST00000313754 855 ntBASIC16.15■□□□□ 0.18
H3F3AP84243 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
H3F3AP84243 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
H3F3AP84243 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
H3F3AP84243 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
H3F3AP84243 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.15■□□□□ 0.18
H3F3AP84243 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
H3F3AP84243 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.15■□□□□ 0.18
H3F3AP84243 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.15■□□□□ 0.18
H3F3AP84243 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.15■□□□□ 0.18
H3F3AP84243 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.15■□□□□ 0.18
H3F3AP84243 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.15■□□□□ 0.18
H3F3AP84243 AC009154.2-201ENST00000621177 724 ntBASIC16.15■□□□□ 0.18
H3F3AP84243 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.15■□□□□ 0.18
H3F3AP84243 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
H3F3AP84243 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
H3F3AP84243 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
H3F3AP84243 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
H3F3AP84243 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
H3F3AP84243 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
H3F3AP84243 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.15■□□□□ 0.18
H3F3AP84243 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
H3F3AP84243 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
H3F3AP84243 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
H3F3AP84243 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
H3F3AP84243 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
H3F3AP84243 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
H3F3AP84243 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
H3F3AP84243 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.15■□□□□ 0.18
H3F3AP84243 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
H3F3AP84243 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
H3F3AP84243 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
H3F3AP84243 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.14■□□□□ 0.17
H3F3AP84243 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
H3F3AP84243 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
H3F3AP84243 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
H3F3AP84243 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
H3F3AP84243 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
H3F3AP84243 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
H3F3AP84243 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
H3F3AP84243 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
H3F3AP84243 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
H3F3AP84243 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.14■□□□□ 0.17
H3F3AP84243 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
H3F3AP84243 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.14■□□□□ 0.17
H3F3AP84243 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
H3F3AP84243 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.14■□□□□ 0.17
H3F3AP84243 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
H3F3AP84243 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.14■□□□□ 0.17
H3F3AP84243 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
H3F3AP84243 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
H3F3AP84243 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.14■□□□□ 0.17
H3F3AP84243 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.14■□□□□ 0.17
H3F3AP84243 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.14■□□□□ 0.17
H3F3AP84243 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
H3F3AP84243 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.14■□□□□ 0.17
H3F3AP84243 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
H3F3AP84243 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
H3F3AP84243 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.14■□□□□ 0.17
H3F3AP84243 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.14■□□□□ 0.17
H3F3AP84243 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
H3F3AP84243 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
H3F3AP84243 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.14■□□□□ 0.17
H3F3AP84243 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
H3F3AP84243 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.14■□□□□ 0.17
H3F3AP84243 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
H3F3AP84243 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
H3F3AP84243 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
H3F3AP84243 NOC2LP1-202ENST00000452600 2235 ntBASIC16.14■□□□□ 0.17
H3F3AP84243 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
H3F3AP84243 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
H3F3AP84243 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
H3F3AP84243 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.14■□□□□ 0.17
H3F3AP84243 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
H3F3AP84243 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
H3F3AP84243 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.14■□□□□ 0.17
H3F3AP84243 AP000997.3-201ENST00000623333 2250 ntBASIC16.14■□□□□ 0.17
H3F3AP84243 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
H3F3AP84243 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
H3F3AP84243 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.13■□□□□ 0.17
H3F3AP84243 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H3F3AP84243 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
H3F3AP84243 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.13■□□□□ 0.17
H3F3AP84243 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H3F3AP84243 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H3F3AP84243 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.13■□□□□ 0.17
H3F3AP84243 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H3F3AP84243 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
H3F3AP84243 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.13■□□□□ 0.17
H3F3AP84243 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H3F3AP84243 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
H3F3AP84243 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms