Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CLDN20P56880 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN20P56880 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CLDN20P56880 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN20P56880 AL391807.1-203ENST00000604392 2365 ntBASIC16.57■□□□□ 0.24
CLDN20P56880 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN20P56880 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN20P56880 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN20P56880 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.57■□□□□ 0.24
CLDN20P56880 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN20P56880 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN20P56880 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CLDN20P56880 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN20P56880 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CLDN20P56880 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.57■□□□□ 0.24
CLDN20P56880 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN20P56880 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.57■□□□□ 0.24
CLDN20P56880 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.57■□□□□ 0.24
CLDN20P56880 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.57■□□□□ 0.24
CLDN20P56880 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.57■□□□□ 0.24
CLDN20P56880 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN20P56880 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN20P56880 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN20P56880 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CLDN20P56880 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN20P56880 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN20P56880 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CLDN20P56880 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CLDN20P56880 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN20P56880 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.56■□□□□ 0.24
CLDN20P56880 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.56■□□□□ 0.24
CLDN20P56880 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN20P56880 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN20P56880 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN20P56880 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN20P56880 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN20P56880 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN20P56880 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN20P56880 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CLDN20P56880 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN20P56880 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN20P56880 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.56■□□□□ 0.24
CLDN20P56880 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.56■□□□□ 0.24
CLDN20P56880 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN20P56880 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN20P56880 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.56■□□□□ 0.24
CLDN20P56880 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN20P56880 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN20P56880 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN20P56880 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN20P56880 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN20P56880 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN20P56880 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN20P56880 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN20P56880 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.55■□□□□ 0.24
CLDN20P56880 AC126763.1-201ENST00000552015 2118 ntBASIC16.55■□□□□ 0.24
CLDN20P56880 LINC00896-202ENST00000609602 2128 ntBASIC16.55■□□□□ 0.24
CLDN20P56880 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.55■□□□□ 0.24
CLDN20P56880 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CLDN20P56880 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN20P56880 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN20P56880 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN20P56880 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN20P56880 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN20P56880 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN20P56880 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN20P56880 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN20P56880 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN20P56880 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN20P56880 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN20P56880 AC005332.1-201ENST00000577698 1310 ntBASIC16.55■□□□□ 0.24
CLDN20P56880 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN20P56880 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN20P56880 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
CLDN20P56880 PCED1CP-201ENST00000419887 785 ntBASIC16.55■□□□□ 0.24
CLDN20P56880 HLA-F-220ENST00000434407 884 ntBASIC16.55■□□□□ 0.24
CLDN20P56880 PVRIG2P-201ENST00000435460 978 ntBASIC16.55■□□□□ 0.24
CLDN20P56880 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN20P56880 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.55■□□□□ 0.24
CLDN20P56880 AL136038.3-201ENST00000561909 1096 ntBASIC16.55■□□□□ 0.24
CLDN20P56880 AC009065.1-201ENST00000564055 1225 ntBASIC16.55■□□□□ 0.24
CLDN20P56880 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.55■□□□□ 0.24
CLDN20P56880 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN20P56880 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN20P56880 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN20P56880 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN20P56880 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN20P56880 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.55■□□□□ 0.24
CLDN20P56880 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN20P56880 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.55■□□□□ 0.24
CLDN20P56880 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.55■□□□□ 0.24
CLDN20P56880 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN20P56880 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN20P56880 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN20P56880 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN20P56880 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN20P56880 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.55■□□□□ 0.24
CLDN20P56880 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN20P56880 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.54■□□□□ 0.24
CLDN20P56880 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms