Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.92■□□□□ 0.78
GPC3P51654 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.92■□□□□ 0.78
GPC3P51654 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.92■□□□□ 0.78
GPC3P51654 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
GPC3P51654 AC005336.2-201ENST00000593183 939 ntBASIC19.92■□□□□ 0.78
GPC3P51654 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.92■□□□□ 0.78
GPC3P51654 AL031008.1-201ENST00000619963 541 ntBASIC19.92■□□□□ 0.78
GPC3P51654 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
GPC3P51654 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GPC3P51654 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
GPC3P51654 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
GPC3P51654 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GPC3P51654 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.92■□□□□ 0.78
GPC3P51654 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
GPC3P51654 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
GPC3P51654 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.92■□□□□ 0.78
GPC3P51654 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
GPC3P51654 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
GPC3P51654 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
GPC3P51654 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
GPC3P51654 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GPC3P51654 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.91■□□□□ 0.78
GPC3P51654 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GPC3P51654 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GPC3P51654 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
GPC3P51654 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
GPC3P51654 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
GPC3P51654 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
GPC3P51654 POM121L3P-201ENST00000419331 1163 ntBASIC19.91■□□□□ 0.78
GPC3P51654 FDX1P1-201ENST00000449115 551 ntBASIC19.91■□□□□ 0.78
GPC3P51654 KRT16P4-201ENST00000453883 522 ntBASIC19.91■□□□□ 0.78
GPC3P51654 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GPC3P51654 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.91■□□□□ 0.78
GPC3P51654 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.91■□□□□ 0.78
GPC3P51654 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.91■□□□□ 0.78
GPC3P51654 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.91■□□□□ 0.78
GPC3P51654 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.91■□□□□ 0.78
GPC3P51654 AC104692.2-201ENST00000603054 253 ntBASIC19.91■□□□□ 0.78
GPC3P51654 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.91■□□□□ 0.78
GPC3P51654 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.91■□□□□ 0.78
GPC3P51654 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
GPC3P51654 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.91■□□□□ 0.78
GPC3P51654 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
GPC3P51654 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.91■□□□□ 0.78
GPC3P51654 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GPC3P51654 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GPC3P51654 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GPC3P51654 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
GPC3P51654 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GPC3P51654 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.91■□□□□ 0.78
GPC3P51654 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GPC3P51654 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
GPC3P51654 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.9■□□□□ 0.78
GPC3P51654 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
GPC3P51654 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GPC3P51654 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
GPC3P51654 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.9■□□□□ 0.78
GPC3P51654 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.9■□□□□ 0.78
GPC3P51654 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GPC3P51654 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GPC3P51654 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GPC3P51654 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
GPC3P51654 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GPC3P51654 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GPC3P51654 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
GPC3P51654 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.9■□□□□ 0.78
GPC3P51654 MTCL1P1-201ENST00000446207 792 ntBASIC19.9■□□□□ 0.78
GPC3P51654 AC079781.3-201ENST00000449110 356 ntBASIC19.9■□□□□ 0.78
GPC3P51654 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
GPC3P51654 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.9■□□□□ 0.78
GPC3P51654 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.9■□□□□ 0.78
GPC3P51654 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.9■□□□□ 0.78
GPC3P51654 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
GPC3P51654 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GPC3P51654 GMCL1P1-201ENST00000463439 1581 ntBASIC19.9■□□□□ 0.78
GPC3P51654 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.9■□□□□ 0.78
GPC3P51654 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.9■□□□□ 0.78
GPC3P51654 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.9■□□□□ 0.78
GPC3P51654 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
GPC3P51654 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
GPC3P51654 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
GPC3P51654 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.78
GPC3P51654 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.89■□□□□ 0.78
GPC3P51654 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
GPC3P51654 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
GPC3P51654 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
GPC3P51654 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GPC3P51654 AKR1C7P-201ENST00000305623 895 ntBASIC19.89■□□□□ 0.77
GPC3P51654 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
GPC3P51654 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GPC3P51654 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
GPC3P51654 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GPC3P51654 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GPC3P51654 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
GPC3P51654 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
GPC3P51654 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GPC3P51654 KRT8P10-201ENST00000450021 1447 ntBASIC19.89■□□□□ 0.77
GPC3P51654 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.89■□□□□ 0.77
GPC3P51654 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GPC3P51654 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms