Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KNTC1P50748 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.12■□□□□ 0.33
KNTC1P50748 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.12■□□□□ 0.33
KNTC1P50748 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KNTC1P50748 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.12■□□□□ 0.33
KNTC1P50748 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KNTC1P50748 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.12■□□□□ 0.33
KNTC1P50748 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KNTC1P50748 AL049812.1-201ENST00000432563 2267 ntBASIC17.12■□□□□ 0.33
KNTC1P50748 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
KNTC1P50748 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KNTC1P50748 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KNTC1P50748 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KNTC1P50748 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KNTC1P50748 PRYP5-201ENST00000451909 266 ntBASIC17.12■□□□□ 0.33
KNTC1P50748 AC018845.2-201ENST00000568326 409 ntBASIC17.12■□□□□ 0.33
KNTC1P50748 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KNTC1P50748 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
KNTC1P50748 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KNTC1P50748 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KNTC1P50748 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.11■□□□□ 0.33
KNTC1P50748 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.11■□□□□ 0.33
KNTC1P50748 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.11■□□□□ 0.33
KNTC1P50748 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.11■□□□□ 0.33
KNTC1P50748 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KNTC1P50748 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
KNTC1P50748 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KNTC1P50748 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KNTC1P50748 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
KNTC1P50748 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KNTC1P50748 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.11■□□□□ 0.33
KNTC1P50748 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.11■□□□□ 0.33
KNTC1P50748 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.11■□□□□ 0.33
KNTC1P50748 AC108751.1-201ENST00000490852 363 ntBASIC17.11■□□□□ 0.33
KNTC1P50748 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.11■□□□□ 0.33
KNTC1P50748 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.11■□□□□ 0.33
KNTC1P50748 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KNTC1P50748 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KNTC1P50748 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.11■□□□□ 0.33
KNTC1P50748 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KNTC1P50748 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KNTC1P50748 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KNTC1P50748 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
KNTC1P50748 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KNTC1P50748 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
KNTC1P50748 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.11■□□□□ 0.33
KNTC1P50748 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
KNTC1P50748 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KNTC1P50748 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
KNTC1P50748 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
KNTC1P50748 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.11■□□□□ 0.33
KNTC1P50748 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.11■□□□□ 0.33
KNTC1P50748 AC006557.2-201ENST00000592985 1240 ntBASIC17.11■□□□□ 0.33
KNTC1P50748 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.11■□□□□ 0.33
KNTC1P50748 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.1■□□□□ 0.33
KNTC1P50748 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.1■□□□□ 0.33
KNTC1P50748 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KNTC1P50748 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
KNTC1P50748 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.1■□□□□ 0.33
KNTC1P50748 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KNTC1P50748 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KNTC1P50748 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
KNTC1P50748 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KNTC1P50748 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KNTC1P50748 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KNTC1P50748 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.1■□□□□ 0.33
KNTC1P50748 KRT18P65-201ENST00000439811 1286 ntBASIC17.1■□□□□ 0.33
KNTC1P50748 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
KNTC1P50748 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.1■□□□□ 0.33
KNTC1P50748 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.1■□□□□ 0.33
KNTC1P50748 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.1■□□□□ 0.33
KNTC1P50748 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.1■□□□□ 0.33
KNTC1P50748 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
KNTC1P50748 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.1■□□□□ 0.33
KNTC1P50748 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.1■□□□□ 0.33
KNTC1P50748 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.1■□□□□ 0.33
KNTC1P50748 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
KNTC1P50748 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.09■□□□□ 0.33
KNTC1P50748 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KNTC1P50748 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
KNTC1P50748 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.09■□□□□ 0.33
KNTC1P50748 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.09■□□□□ 0.33
KNTC1P50748 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.09■□□□□ 0.33
KNTC1P50748 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.09■□□□□ 0.33
KNTC1P50748 AC092865.6-201ENST00000642101 219 ntBASIC17.09■□□□□ 0.33
KNTC1P50748 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
KNTC1P50748 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.09■□□□□ 0.33
KNTC1P50748 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.09■□□□□ 0.33
KNTC1P50748 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
KNTC1P50748 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KNTC1P50748 AL499627.1-201ENST00000569373 2188 ntBASIC17.09■□□□□ 0.33
KNTC1P50748 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KNTC1P50748 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.09■□□□□ 0.33
KNTC1P50748 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.09■□□□□ 0.33
KNTC1P50748 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
KNTC1P50748 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.09■□□□□ 0.33
KNTC1P50748 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
KNTC1P50748 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.09■□□□□ 0.33
KNTC1P50748 MIR149-201ENST00000384879 89 ntBASIC17.09■□□□□ 0.33
KNTC1P50748 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms