Protein–RNA interactions for Protein: P49760

CLK2, Dual specificity protein kinase CLK2, humanhuman

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2P49760 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CLK2P49760 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLK2P49760 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.43■□□□□ 0.86
CLK2P49760 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.43■□□□□ 0.86
CLK2P49760 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLK2P49760 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
CLK2P49760 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.43■□□□□ 0.86
CLK2P49760 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CLK2P49760 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLK2P49760 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.42■□□□□ 0.86
CLK2P49760 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLK2P49760 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CLK2P49760 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
CLK2P49760 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CLK2P49760 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.42■□□□□ 0.86
CLK2P49760 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.42■□□□□ 0.86
CLK2P49760 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLK2P49760 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CLK2P49760 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.42■□□□□ 0.86
CLK2P49760 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.42■□□□□ 0.86
CLK2P49760 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.42■□□□□ 0.86
CLK2P49760 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.42■□□□□ 0.86
CLK2P49760 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.42■□□□□ 0.86
CLK2P49760 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.42■□□□□ 0.86
CLK2P49760 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.42■□□□□ 0.86
CLK2P49760 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLK2P49760 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.42■□□□□ 0.86
CLK2P49760 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CLK2P49760 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
CLK2P49760 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLK2P49760 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CLK2P49760 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.42■□□□□ 0.86
CLK2P49760 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLK2P49760 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CLK2P49760 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLK2P49760 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.42■□□□□ 0.86
CLK2P49760 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.41■□□□□ 0.86
CLK2P49760 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLK2P49760 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.41■□□□□ 0.86
CLK2P49760 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLK2P49760 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLK2P49760 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLK2P49760 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.41■□□□□ 0.86
CLK2P49760 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLK2P49760 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLK2P49760 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.41■□□□□ 0.86
CLK2P49760 TSPY19P-201ENST00000418461 509 ntBASIC20.41■□□□□ 0.86
CLK2P49760 TSPY18P-201ENST00000441642 509 ntBASIC20.41■□□□□ 0.86
CLK2P49760 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.41■□□□□ 0.86
CLK2P49760 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.41■□□□□ 0.86
CLK2P49760 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.41■□□□□ 0.86
CLK2P49760 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.41■□□□□ 0.86
CLK2P49760 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.41■□□□□ 0.86
CLK2P49760 AC099336.1-202ENST00000602961 463 ntBASIC20.41■□□□□ 0.86
CLK2P49760 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.41■□□□□ 0.86
CLK2P49760 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
CLK2P49760 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLK2P49760 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.41■□□□□ 0.86
CLK2P49760 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLK2P49760 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CLK2P49760 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLK2P49760 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLK2P49760 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLK2P49760 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.41■□□□□ 0.86
CLK2P49760 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLK2P49760 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLK2P49760 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLK2P49760 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLK2P49760 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLK2P49760 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLK2P49760 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLK2P49760 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLK2P49760 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.4■□□□□ 0.86
CLK2P49760 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
CLK2P49760 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLK2P49760 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLK2P49760 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CLK2P49760 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLK2P49760 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLK2P49760 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.4■□□□□ 0.86
CLK2P49760 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.4■□□□□ 0.86
CLK2P49760 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.4■□□□□ 0.86
CLK2P49760 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.4■□□□□ 0.86
CLK2P49760 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.4■□□□□ 0.86
CLK2P49760 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLK2P49760 FOSL1P1-201ENST00000511041 816 ntBASIC20.4■□□□□ 0.86
CLK2P49760 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
CLK2P49760 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.4■□□□□ 0.86
CLK2P49760 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.4■□□□□ 0.86
CLK2P49760 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.4■□□□□ 0.86
CLK2P49760 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLK2P49760 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLK2P49760 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLK2P49760 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CLK2P49760 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CLK2P49760 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CLK2P49760 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.39■□□□□ 0.86
CLK2P49760 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
CLK2P49760 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.39■□□□□ 0.86
CLK2P49760 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.39■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms