Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.54■□□□□ 0.4
KRT6CP48668 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT6CP48668 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.54■□□□□ 0.4
KRT6CP48668 NEK4P2-201ENST00000580004 1012 ntBASIC17.54■□□□□ 0.4
KRT6CP48668 AC008687.5-201ENST00000593746 558 ntBASIC17.54■□□□□ 0.4
KRT6CP48668 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.54■□□□□ 0.4
KRT6CP48668 AC024243.1-201ENST00000609234 778 ntBASIC17.54■□□□□ 0.4
KRT6CP48668 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.54■□□□□ 0.4
KRT6CP48668 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
KRT6CP48668 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT6CP48668 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KRT6CP48668 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
KRT6CP48668 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.54■□□□□ 0.4
KRT6CP48668 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KRT6CP48668 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.54■□□□□ 0.4
KRT6CP48668 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
KRT6CP48668 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT6CP48668 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT6CP48668 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.54■□□□□ 0.4
KRT6CP48668 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KRT6CP48668 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT6CP48668 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KRT6CP48668 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT6CP48668 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT6CP48668 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
KRT6CP48668 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT6CP48668 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.53■□□□□ 0.4
KRT6CP48668 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT6CP48668 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.53■□□□□ 0.4
KRT6CP48668 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT6CP48668 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KRT6CP48668 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
KRT6CP48668 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.53■□□□□ 0.4
KRT6CP48668 AP000523.1-201ENST00000398242 1049 ntBASIC17.53■□□□□ 0.4
KRT6CP48668 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT6CP48668 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.53■□□□□ 0.4
KRT6CP48668 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.53■□□□□ 0.4
KRT6CP48668 FAM87A-204ENST00000613235 858 ntBASIC17.53■□□□□ 0.4
KRT6CP48668 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.53■□□□□ 0.4
KRT6CP48668 AC092865.7-201ENST00000641832 219 ntBASIC17.53■□□□□ 0.4
KRT6CP48668 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KRT6CP48668 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT6CP48668 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT6CP48668 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT6CP48668 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT6CP48668 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.53■□□□□ 0.4
KRT6CP48668 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
KRT6CP48668 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT6CP48668 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT6CP48668 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.53■□□□□ 0.4
KRT6CP48668 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.53■□□□□ 0.4
KRT6CP48668 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6CP48668 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6CP48668 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6CP48668 KRT18P55-202ENST00000578578 1546 ntBASIC17.52■□□□□ 0.4
KRT6CP48668 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.52■□□□□ 0.4
KRT6CP48668 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6CP48668 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6CP48668 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.52■□□□□ 0.4
KRT6CP48668 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6CP48668 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6CP48668 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.52■□□□□ 0.4
KRT6CP48668 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.52■□□□□ 0.4
KRT6CP48668 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6CP48668 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
KRT6CP48668 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6CP48668 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6CP48668 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6CP48668 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6CP48668 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6CP48668 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6CP48668 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6CP48668 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.52■□□□□ 0.4
KRT6CP48668 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6CP48668 ECEL1P2-202ENST00000465689 757 ntBASIC17.52■□□□□ 0.4
KRT6CP48668 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.52■□□□□ 0.4
KRT6CP48668 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.52■□□□□ 0.4
KRT6CP48668 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.52■□□□□ 0.4
KRT6CP48668 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.52■□□□□ 0.4
KRT6CP48668 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6CP48668 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.52■□□□□ 0.4
KRT6CP48668 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.52■□□□□ 0.4
KRT6CP48668 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6CP48668 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6CP48668 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6CP48668 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.52■□□□□ 0.4
KRT6CP48668 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
KRT6CP48668 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
KRT6CP48668 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
KRT6CP48668 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
KRT6CP48668 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.52■□□□□ 0.39
KRT6CP48668 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
KRT6CP48668 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
KRT6CP48668 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
KRT6CP48668 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
KRT6CP48668 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
KRT6CP48668 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
KRT6CP48668 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
KRT6CP48668 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.51■□□□□ 0.39
KRT6CP48668 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms