Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
COL15A1P39059 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC22.78■■□□□ 1.24
COL15A1P39059 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
COL15A1P39059 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
COL15A1P39059 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC22.78■■□□□ 1.24
COL15A1P39059 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
COL15A1P39059 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC22.78■■□□□ 1.24
COL15A1P39059 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
COL15A1P39059 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
COL15A1P39059 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC22.77■■□□□ 1.24
COL15A1P39059 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC22.77■■□□□ 1.24
COL15A1P39059 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
COL15A1P39059 AC007967.2-201ENST00000432613 625 ntBASIC22.77■■□□□ 1.24
COL15A1P39059 FIS1-203ENST00000442303 631 ntTSL 3 BASIC22.77■■□□□ 1.24
COL15A1P39059 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC22.77■■□□□ 1.24
COL15A1P39059 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC22.77■■□□□ 1.24
COL15A1P39059 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC22.77■■□□□ 1.24
COL15A1P39059 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC22.77■■□□□ 1.24
COL15A1P39059 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC22.77■■□□□ 1.24
COL15A1P39059 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC22.77■■□□□ 1.24
COL15A1P39059 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC22.77■■□□□ 1.24
COL15A1P39059 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
COL15A1P39059 AL138781.2-201ENST00000617896 1843 ntBASIC22.77■■□□□ 1.24
COL15A1P39059 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC22.77■■□□□ 1.24
COL15A1P39059 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
COL15A1P39059 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC22.77■■□□□ 1.24
COL15A1P39059 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
COL15A1P39059 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
COL15A1P39059 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
COL15A1P39059 AC079776.2-201ENST00000641154 1609 ntBASIC22.77■■□□□ 1.23
COL15A1P39059 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
COL15A1P39059 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC22.76■■□□□ 1.23
COL15A1P39059 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC22.76■■□□□ 1.23
COL15A1P39059 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC22.76■■□□□ 1.23
COL15A1P39059 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC22.76■■□□□ 1.23
COL15A1P39059 MSRA-206ENST00000521209 814 ntTSL 3 BASIC22.76■■□□□ 1.23
COL15A1P39059 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC22.76■■□□□ 1.23
COL15A1P39059 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC22.76■■□□□ 1.23
COL15A1P39059 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
COL15A1P39059 AC132938.6-201ENST00000623828 1655 ntBASIC22.76■■□□□ 1.23
COL15A1P39059 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
COL15A1P39059 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
COL15A1P39059 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC22.76■■□□□ 1.23
COL15A1P39059 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
COL15A1P39059 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC22.76■■□□□ 1.23
COL15A1P39059 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
COL15A1P39059 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
COL15A1P39059 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC22.76■■□□□ 1.23
COL15A1P39059 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
COL15A1P39059 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
COL15A1P39059 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
COL15A1P39059 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
COL15A1P39059 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC22.76■■□□□ 1.23
COL15A1P39059 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
COL15A1P39059 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
COL15A1P39059 AC009947.1-201ENST00000444350 727 ntBASIC22.76■■□□□ 1.23
COL15A1P39059 BX005266.1-201ENST00000473402 457 ntBASIC22.76■■□□□ 1.23
COL15A1P39059 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC22.76■■□□□ 1.23
COL15A1P39059 RNA5SP416-201ENST00000516838 111 ntBASIC22.76■■□□□ 1.23
COL15A1P39059 AC126763.1-201ENST00000552015 2118 ntBASIC22.76■■□□□ 1.23
COL15A1P39059 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC22.76■■□□□ 1.23
COL15A1P39059 AP001160.2-201ENST00000596071 487 ntBASIC22.76■■□□□ 1.23
COL15A1P39059 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC22.76■■□□□ 1.23
COL15A1P39059 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
COL15A1P39059 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
COL15A1P39059 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
COL15A1P39059 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC22.75■■□□□ 1.23
COL15A1P39059 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
COL15A1P39059 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
COL15A1P39059 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
COL15A1P39059 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
COL15A1P39059 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
COL15A1P39059 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
COL15A1P39059 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
COL15A1P39059 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
COL15A1P39059 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC22.75■■□□□ 1.23
COL15A1P39059 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
COL15A1P39059 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
COL15A1P39059 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
COL15A1P39059 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC22.75■■□□□ 1.23
COL15A1P39059 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
COL15A1P39059 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
COL15A1P39059 GGCT-205ENST00000409436 954 ntTSL 3 BASIC22.75■■□□□ 1.23
COL15A1P39059 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC22.75■■□□□ 1.23
COL15A1P39059 CRCP-205ENST00000431089 942 ntTSL 2 BASIC22.75■■□□□ 1.23
COL15A1P39059 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC22.75■■□□□ 1.23
COL15A1P39059 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC22.75■■□□□ 1.23
COL15A1P39059 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC22.75■■□□□ 1.23
COL15A1P39059 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC22.75■■□□□ 1.23
COL15A1P39059 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
COL15A1P39059 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC22.74■■□□□ 1.23
COL15A1P39059 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC22.74■■□□□ 1.23
COL15A1P39059 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
COL15A1P39059 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
COL15A1P39059 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
COL15A1P39059 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
COL15A1P39059 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
COL15A1P39059 CD9-202ENST00000382515 1229 ntTSL 5 BASIC22.74■■□□□ 1.23
COL15A1P39059 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
COL15A1P39059 KRT18P27-201ENST00000427733 1299 ntBASIC22.74■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms