Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 LINC02228-204ENST00000642115 2962 ntBASIC13.88□□□□□ -0.19
RAB4AP20338 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
RAB4AP20338 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RAB4AP20338 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB4AP20338 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB4AP20338 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RAB4AP20338 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB4AP20338 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RAB4AP20338 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB4AP20338 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
RAB4AP20338 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC13.87□□□□□ -0.19
RAB4AP20338 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC13.87□□□□□ -0.19
RAB4AP20338 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RAB4AP20338 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RAB4AP20338 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC13.87□□□□□ -0.19
RAB4AP20338 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC13.87□□□□□ -0.19
RAB4AP20338 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
RAB4AP20338 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB4AP20338 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
RAB4AP20338 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC13.87□□□□□ -0.19
RAB4AP20338 NARF-204ENST00000390006 1766 ntTSL 2 BASIC13.87□□□□□ -0.19
RAB4AP20338 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
RAB4AP20338 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB4AP20338 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.87□□□□□ -0.19
RAB4AP20338 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB4AP20338 CALM3-202ENST00000391918 702 ntTSL 2 BASIC13.87□□□□□ -0.19
RAB4AP20338 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
RAB4AP20338 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB4AP20338 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC13.87□□□□□ -0.19
RAB4AP20338 BRI3-207ENST00000539286 699 ntTSL 2 BASIC13.87□□□□□ -0.19
RAB4AP20338 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC13.87□□□□□ -0.19
RAB4AP20338 C2orf69P4-201ENST00000565394 541 ntBASIC13.87□□□□□ -0.19
RAB4AP20338 AC013268.1-206ENST00000638368 961 ntBASIC13.87□□□□□ -0.19
RAB4AP20338 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC13.87□□□□□ -0.19
RAB4AP20338 AC112229.1-201ENST00000639295 961 ntBASIC13.87□□□□□ -0.19
RAB4AP20338 AC083906.6-201ENST00000641366 219 ntBASIC13.87□□□□□ -0.19
RAB4AP20338 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB4AP20338 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB4AP20338 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.87□□□□□ -0.19
RAB4AP20338 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.87□□□□□ -0.19
RAB4AP20338 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB4AP20338 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB4AP20338 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC13.87□□□□□ -0.19
RAB4AP20338 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC13.87□□□□□ -0.19
RAB4AP20338 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB4AP20338 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB4AP20338 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB4AP20338 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB4AP20338 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RAB4AP20338 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RAB4AP20338 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB4AP20338 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB4AP20338 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB4AP20338 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB4AP20338 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC13.87□□□□□ -0.19
RAB4AP20338 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB4AP20338 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB4AP20338 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB4AP20338 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC13.86□□□□□ -0.19
RAB4AP20338 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RAB4AP20338 GNE-204ENST00000539208 2190 ntTSL 2 BASIC13.86□□□□□ -0.19
RAB4AP20338 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.86□□□□□ -0.19
RAB4AP20338 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB4AP20338 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB4AP20338 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB4AP20338 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC13.86□□□□□ -0.19
RAB4AP20338 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB4AP20338 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC13.86□□□□□ -0.19
RAB4AP20338 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RAB4AP20338 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB4AP20338 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB4AP20338 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
RAB4AP20338 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB4AP20338 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB4AP20338 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RAB4AP20338 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
RAB4AP20338 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RAB4AP20338 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC13.86□□□□□ -0.19
RAB4AP20338 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC13.86□□□□□ -0.19
RAB4AP20338 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC13.86□□□□□ -0.19
RAB4AP20338 AC142381.2-201ENST00000566120 298 ntBASIC13.86□□□□□ -0.19
RAB4AP20338 PLLP-204ENST00000569059 665 ntTSL 3 BASIC13.86□□□□□ -0.19
RAB4AP20338 GALNS-213ENST00000569433 723 ntTSL 3 BASIC13.86□□□□□ -0.19
RAB4AP20338 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RAB4AP20338 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
RAB4AP20338 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB4AP20338 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB4AP20338 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB4AP20338 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB4AP20338 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC13.86□□□□□ -0.19
RAB4AP20338 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB4AP20338 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RAB4AP20338 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.86□□□□□ -0.19
RAB4AP20338 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RAB4AP20338 SBF1P1-201ENST00000444527 5631 ntBASIC13.86□□□□□ -0.19
RAB4AP20338 HYMAI-201ENST00000635591 3347 ntBASIC13.86□□□□□ -0.19
RAB4AP20338 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB4AP20338 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RAB4AP20338 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB4AP20338 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms