Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.28■□□□□ 0.68
FAM228BP0C875 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FAM228BP0C875 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
FAM228BP0C875 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FAM228BP0C875 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FAM228BP0C875 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
FAM228BP0C875 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
FAM228BP0C875 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
FAM228BP0C875 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.27■□□□□ 0.68
FAM228BP0C875 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
FAM228BP0C875 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
FAM228BP0C875 LINC00167-201ENST00000530583 1419 ntBASIC19.27■□□□□ 0.68
FAM228BP0C875 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.27■□□□□ 0.68
FAM228BP0C875 SIRPAP1-201ENST00000448467 1770 ntBASIC19.27■□□□□ 0.68
FAM228BP0C875 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
FAM228BP0C875 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.27■□□□□ 0.68
FAM228BP0C875 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
FAM228BP0C875 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.27■□□□□ 0.68
FAM228BP0C875 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
FAM228BP0C875 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.27■□□□□ 0.68
FAM228BP0C875 ECEL1P2-202ENST00000465689 757 ntBASIC19.27■□□□□ 0.68
FAM228BP0C875 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.27■□□□□ 0.68
FAM228BP0C875 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
FAM228BP0C875 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
FAM228BP0C875 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.27■□□□□ 0.68
FAM228BP0C875 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
FAM228BP0C875 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
FAM228BP0C875 MIR3917-201ENST00000580971 93 ntBASIC19.27■□□□□ 0.68
FAM228BP0C875 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.27■□□□□ 0.68
FAM228BP0C875 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
FAM228BP0C875 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.27■□□□□ 0.68
FAM228BP0C875 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.27■□□□□ 0.68
FAM228BP0C875 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.27■□□□□ 0.68
FAM228BP0C875 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
FAM228BP0C875 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
FAM228BP0C875 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
FAM228BP0C875 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
FAM228BP0C875 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
FAM228BP0C875 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
FAM228BP0C875 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
FAM228BP0C875 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
FAM228BP0C875 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
FAM228BP0C875 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
FAM228BP0C875 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
FAM228BP0C875 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FAM228BP0C875 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
FAM228BP0C875 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FAM228BP0C875 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
FAM228BP0C875 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
FAM228BP0C875 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.26■□□□□ 0.67
FAM228BP0C875 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
FAM228BP0C875 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
FAM228BP0C875 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
FAM228BP0C875 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
FAM228BP0C875 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
FAM228BP0C875 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FAM228BP0C875 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FAM228BP0C875 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.26■□□□□ 0.67
FAM228BP0C875 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
FAM228BP0C875 NAPSB-206ENST00000562112 1266 ntBASIC19.26■□□□□ 0.67
FAM228BP0C875 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
FAM228BP0C875 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FAM228BP0C875 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FAM228BP0C875 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.26■□□□□ 0.67
FAM228BP0C875 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
FAM228BP0C875 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
FAM228BP0C875 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
FAM228BP0C875 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FAM228BP0C875 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
FAM228BP0C875 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
FAM228BP0C875 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FAM228BP0C875 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.25■□□□□ 0.67
FAM228BP0C875 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FAM228BP0C875 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
FAM228BP0C875 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.25■□□□□ 0.67
FAM228BP0C875 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.25■□□□□ 0.67
FAM228BP0C875 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.25■□□□□ 0.67
FAM228BP0C875 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
FAM228BP0C875 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FAM228BP0C875 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
FAM228BP0C875 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
FAM228BP0C875 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.25■□□□□ 0.67
FAM228BP0C875 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
FAM228BP0C875 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FAM228BP0C875 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FAM228BP0C875 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
FAM228BP0C875 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FAM228BP0C875 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FAM228BP0C875 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
FAM228BP0C875 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.25■□□□□ 0.67
FAM228BP0C875 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
FAM228BP0C875 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.25■□□□□ 0.67
FAM228BP0C875 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.25■□□□□ 0.67
FAM228BP0C875 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
FAM228BP0C875 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.25■□□□□ 0.67
FAM228BP0C875 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FAM228BP0C875 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
FAM228BP0C875 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.25■□□□□ 0.67
FAM228BP0C875 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FAM228BP0C875 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms