Protein–RNA interactions for Protein: P09455

RBP1, Retinol-binding protein 1, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBP1P09455 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RBP1P09455 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RBP1P09455 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RBP1P09455 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.82■□□□□ 0.44
RBP1P09455 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RBP1P09455 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.82■□□□□ 0.44
RBP1P09455 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RBP1P09455 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.82■□□□□ 0.44
RBP1P09455 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.82■□□□□ 0.44
RBP1P09455 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RBP1P09455 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RBP1P09455 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RBP1P09455 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RBP1P09455 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RBP1P09455 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RBP1P09455 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RBP1P09455 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RBP1P09455 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RBP1P09455 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RBP1P09455 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RBP1P09455 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.82■□□□□ 0.44
RBP1P09455 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RBP1P09455 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.81■□□□□ 0.44
RBP1P09455 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
RBP1P09455 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RBP1P09455 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
RBP1P09455 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.81■□□□□ 0.44
RBP1P09455 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RBP1P09455 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
RBP1P09455 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
RBP1P09455 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
RBP1P09455 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RBP1P09455 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.81■□□□□ 0.44
RBP1P09455 SEC1P-202ENST00000473944 940 ntBASIC17.81■□□□□ 0.44
RBP1P09455 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.81■□□□□ 0.44
RBP1P09455 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RBP1P09455 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.81■□□□□ 0.44
RBP1P09455 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RBP1P09455 AL355075.4-201ENST00000554988 638 ntBASIC17.81■□□□□ 0.44
RBP1P09455 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RBP1P09455 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RBP1P09455 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RBP1P09455 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RBP1P09455 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
RBP1P09455 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RBP1P09455 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
RBP1P09455 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RBP1P09455 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.81■□□□□ 0.44
RBP1P09455 SIRPAP1-201ENST00000448467 1770 ntBASIC17.81■□□□□ 0.44
RBP1P09455 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RBP1P09455 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
RBP1P09455 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.81■□□□□ 0.44
RBP1P09455 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.81■□□□□ 0.44
RBP1P09455 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
RBP1P09455 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
RBP1P09455 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
RBP1P09455 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.8■□□□□ 0.44
RBP1P09455 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.8■□□□□ 0.44
RBP1P09455 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.8■□□□□ 0.44
RBP1P09455 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RBP1P09455 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RBP1P09455 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.8■□□□□ 0.44
RBP1P09455 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RBP1P09455 AC022898.2-201ENST00000616822 1312 ntBASIC17.8■□□□□ 0.44
RBP1P09455 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RBP1P09455 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RBP1P09455 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RBP1P09455 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
RBP1P09455 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RBP1P09455 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RBP1P09455 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RBP1P09455 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RBP1P09455 SNORA78-201ENST00000459373 127 ntBASIC17.8■□□□□ 0.44
RBP1P09455 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RBP1P09455 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.8■□□□□ 0.44
RBP1P09455 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RBP1P09455 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RBP1P09455 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RBP1P09455 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RBP1P09455 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RBP1P09455 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RBP1P09455 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RBP1P09455 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.8■□□□□ 0.44
RBP1P09455 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RBP1P09455 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
RBP1P09455 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
RBP1P09455 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
RBP1P09455 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
RBP1P09455 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.8■□□□□ 0.44
RBP1P09455 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RBP1P09455 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RBP1P09455 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RBP1P09455 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.79■□□□□ 0.44
RBP1P09455 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RBP1P09455 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RBP1P09455 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.79■□□□□ 0.44
RBP1P09455 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RBP1P09455 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RBP1P09455 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RBP1P09455 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms