Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.08■□□□□ 0.32
CTSBP07858 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.08■□□□□ 0.32
CTSBP07858 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CTSBP07858 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.08■□□□□ 0.32
CTSBP07858 KRT16P4-201ENST00000453883 522 ntBASIC17.08■□□□□ 0.32
CTSBP07858 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CTSBP07858 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.08■□□□□ 0.32
CTSBP07858 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.08■□□□□ 0.32
CTSBP07858 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CTSBP07858 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.08■□□□□ 0.32
CTSBP07858 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CTSBP07858 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CTSBP07858 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTSBP07858 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CTSBP07858 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CTSBP07858 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTSBP07858 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTSBP07858 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTSBP07858 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CTSBP07858 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTSBP07858 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CTSBP07858 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTSBP07858 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CTSBP07858 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CTSBP07858 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CTSBP07858 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTSBP07858 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.07■□□□□ 0.32
CTSBP07858 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.07■□□□□ 0.32
CTSBP07858 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTSBP07858 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTSBP07858 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTSBP07858 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.07■□□□□ 0.32
CTSBP07858 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.07■□□□□ 0.32
CTSBP07858 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTSBP07858 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTSBP07858 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTSBP07858 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTSBP07858 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.07■□□□□ 0.32
CTSBP07858 AC026396.1-201ENST00000419388 421 ntBASIC17.07■□□□□ 0.32
CTSBP07858 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.07■□□□□ 0.32
CTSBP07858 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.07■□□□□ 0.32
CTSBP07858 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.07■□□□□ 0.32
CTSBP07858 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CTSBP07858 MIR5100-201ENST00000579544 119 ntBASIC17.07■□□□□ 0.32
CTSBP07858 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTSBP07858 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.07■□□□□ 0.32
CTSBP07858 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CTSBP07858 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CTSBP07858 NEFHP1-201ENST00000412845 2629 ntBASIC17.07■□□□□ 0.32
CTSBP07858 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTSBP07858 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTSBP07858 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.07■□□□□ 0.32
CTSBP07858 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTSBP07858 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CTSBP07858 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTSBP07858 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTSBP07858 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CTSBP07858 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTSBP07858 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.06■□□□□ 0.32
CTSBP07858 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTSBP07858 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.06■□□□□ 0.32
CTSBP07858 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTSBP07858 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTSBP07858 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CTSBP07858 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CTSBP07858 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTSBP07858 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.06■□□□□ 0.32
CTSBP07858 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.06■□□□□ 0.32
CTSBP07858 TPM4P1-201ENST00000436100 807 ntBASIC17.06■□□□□ 0.32
CTSBP07858 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.06■□□□□ 0.32
CTSBP07858 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.06■□□□□ 0.32
CTSBP07858 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.06■□□□□ 0.32
CTSBP07858 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.06■□□□□ 0.32
CTSBP07858 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.06■□□□□ 0.32
CTSBP07858 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.06■□□□□ 0.32
CTSBP07858 AL031008.1-201ENST00000619963 541 ntBASIC17.06■□□□□ 0.32
CTSBP07858 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CTSBP07858 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTSBP07858 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CTSBP07858 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.06■□□□□ 0.32
CTSBP07858 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTSBP07858 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTSBP07858 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CTSBP07858 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.06■□□□□ 0.32
CTSBP07858 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.06■□□□□ 0.32
CTSBP07858 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.06■□□□□ 0.32
CTSBP07858 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTSBP07858 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CTSBP07858 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.06■□□□□ 0.32
CTSBP07858 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTSBP07858 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.05■□□□□ 0.32
CTSBP07858 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CTSBP07858 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTSBP07858 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.05■□□□□ 0.32
CTSBP07858 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.05■□□□□ 0.32
CTSBP07858 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.05■□□□□ 0.32
CTSBP07858 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.05■□□□□ 0.32
CTSBP07858 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTSBP07858 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTSBP07858 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms