Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
APOEP02649 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
APOEP02649 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
APOEP02649 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
APOEP02649 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
APOEP02649 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
APOEP02649 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
APOEP02649 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
APOEP02649 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.93■□□□□ 0.62
APOEP02649 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.93■□□□□ 0.62
APOEP02649 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
APOEP02649 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.93■□□□□ 0.62
APOEP02649 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.93■□□□□ 0.62
APOEP02649 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
APOEP02649 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.93■□□□□ 0.62
APOEP02649 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
APOEP02649 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
APOEP02649 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
APOEP02649 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
APOEP02649 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
APOEP02649 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.93■□□□□ 0.62
APOEP02649 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.93■□□□□ 0.62
APOEP02649 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.93■□□□□ 0.62
APOEP02649 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
APOEP02649 AC011498.5-201ENST00000592027 486 ntBASIC18.93■□□□□ 0.62
APOEP02649 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
APOEP02649 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.93■□□□□ 0.62
APOEP02649 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.93■□□□□ 0.62
APOEP02649 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.93■□□□□ 0.62
APOEP02649 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.93■□□□□ 0.62
APOEP02649 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
APOEP02649 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
APOEP02649 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
APOEP02649 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
APOEP02649 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
APOEP02649 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
APOEP02649 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
APOEP02649 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
APOEP02649 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
APOEP02649 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
APOEP02649 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
APOEP02649 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
APOEP02649 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
APOEP02649 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
APOEP02649 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
APOEP02649 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.92■□□□□ 0.62
APOEP02649 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
APOEP02649 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
APOEP02649 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
APOEP02649 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
APOEP02649 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.92■□□□□ 0.62
APOEP02649 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.92■□□□□ 0.62
APOEP02649 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.92■□□□□ 0.62
APOEP02649 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.92■□□□□ 0.62
APOEP02649 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.92■□□□□ 0.62
APOEP02649 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.92■□□□□ 0.62
APOEP02649 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.92■□□□□ 0.62
APOEP02649 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.92■□□□□ 0.62
APOEP02649 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
APOEP02649 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
APOEP02649 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
APOEP02649 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
APOEP02649 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
APOEP02649 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
APOEP02649 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.91■□□□□ 0.62
APOEP02649 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
APOEP02649 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
APOEP02649 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
APOEP02649 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
APOEP02649 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
APOEP02649 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
APOEP02649 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
APOEP02649 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
APOEP02649 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
APOEP02649 IGHGP-201ENST00000390555 1178 ntBASIC18.91■□□□□ 0.62
APOEP02649 UPK3BP1-201ENST00000428678 509 ntBASIC18.91■□□□□ 0.62
APOEP02649 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
APOEP02649 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
APOEP02649 GPR32P1-201ENST00000601788 811 ntBASIC18.91■□□□□ 0.62
APOEP02649 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
APOEP02649 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.91■□□□□ 0.62
APOEP02649 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
APOEP02649 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
APOEP02649 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
APOEP02649 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.91■□□□□ 0.62
APOEP02649 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
APOEP02649 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.91■□□□□ 0.62
APOEP02649 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
APOEP02649 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
APOEP02649 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
APOEP02649 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
APOEP02649 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
APOEP02649 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
APOEP02649 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
APOEP02649 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.9■□□□□ 0.62
APOEP02649 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.9■□□□□ 0.62
APOEP02649 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.9■□□□□ 0.62
APOEP02649 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
APOEP02649 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.9■□□□□ 0.62
APOEP02649 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms