Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN11O75508 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CLDN11O75508 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.43■□□□□ 0.54
CLDN11O75508 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN11O75508 NSUN5P1-202ENST00000421140 1535 ntBASIC18.43■□□□□ 0.54
CLDN11O75508 NSUN5P2-203ENST00000457352 1529 ntBASIC18.43■□□□□ 0.54
CLDN11O75508 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CLDN11O75508 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CLDN11O75508 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CLDN11O75508 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN11O75508 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN11O75508 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN11O75508 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
CLDN11O75508 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN11O75508 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN11O75508 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN11O75508 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN11O75508 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN11O75508 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.42■□□□□ 0.54
CLDN11O75508 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN11O75508 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN11O75508 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN11O75508 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN11O75508 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.42■□□□□ 0.54
CLDN11O75508 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.42■□□□□ 0.54
CLDN11O75508 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.42■□□□□ 0.54
CLDN11O75508 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.42■□□□□ 0.54
CLDN11O75508 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.42■□□□□ 0.54
CLDN11O75508 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.42■□□□□ 0.54
CLDN11O75508 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.42■□□□□ 0.54
CLDN11O75508 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN11O75508 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN11O75508 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN11O75508 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN11O75508 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CLDN11O75508 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN11O75508 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
CLDN11O75508 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN11O75508 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN11O75508 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN11O75508 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN11O75508 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.42■□□□□ 0.54
CLDN11O75508 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.42■□□□□ 0.54
CLDN11O75508 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.42■□□□□ 0.54
CLDN11O75508 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN11O75508 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN11O75508 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN11O75508 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN11O75508 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CLDN11O75508 ABALON-201ENST00000629058 1903 ntBASIC18.41■□□□□ 0.54
CLDN11O75508 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.41■□□□□ 0.54
CLDN11O75508 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN11O75508 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN11O75508 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN11O75508 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CLDN11O75508 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.41■□□□□ 0.54
CLDN11O75508 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN11O75508 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN11O75508 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN11O75508 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.41■□□□□ 0.54
CLDN11O75508 MINOS1P3-201ENST00000457048 203 ntBASIC18.41■□□□□ 0.54
CLDN11O75508 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN11O75508 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.41■□□□□ 0.54
CLDN11O75508 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.41■□□□□ 0.54
CLDN11O75508 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.41■□□□□ 0.54
CLDN11O75508 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.41■□□□□ 0.54
CLDN11O75508 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CLDN11O75508 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN11O75508 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CLDN11O75508 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN11O75508 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN11O75508 HCG11-201ENST00000411553 5696 ntBASIC18.4■□□□□ 0.54
CLDN11O75508 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN11O75508 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN11O75508 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.4■□□□□ 0.54
CLDN11O75508 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CLDN11O75508 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN11O75508 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN11O75508 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN11O75508 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN11O75508 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN11O75508 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
CLDN11O75508 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
CLDN11O75508 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN11O75508 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CLDN11O75508 DUSP5P1-201ENST00000441325 1139 ntBASIC18.4■□□□□ 0.54
CLDN11O75508 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.4■□□□□ 0.54
CLDN11O75508 AC005336.2-201ENST00000593183 939 ntBASIC18.4■□□□□ 0.54
CLDN11O75508 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.4■□□□□ 0.54
CLDN11O75508 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.4■□□□□ 0.54
CLDN11O75508 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CLDN11O75508 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CLDN11O75508 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN11O75508 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN11O75508 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN11O75508 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.4■□□□□ 0.54
CLDN11O75508 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN11O75508 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.4■□□□□ 0.54
CLDN11O75508 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN11O75508 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms