Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
LDB2O43679 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.07■□□□□ 0.48
LDB2O43679 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.07■□□□□ 0.48
LDB2O43679 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LDB2O43679 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LDB2O43679 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LDB2O43679 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LDB2O43679 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.07■□□□□ 0.48
LDB2O43679 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.07■□□□□ 0.48
LDB2O43679 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.07■□□□□ 0.48
LDB2O43679 AL671277.2-201ENST00000458060 996 ntBASIC18.07■□□□□ 0.48
LDB2O43679 AP003733.1-201ENST00000491725 852 ntBASIC18.07■□□□□ 0.48
LDB2O43679 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.07■□□□□ 0.48
LDB2O43679 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.07■□□□□ 0.48
LDB2O43679 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.07■□□□□ 0.48
LDB2O43679 ZNF444P1-201ENST00000559497 298 ntBASIC18.07■□□□□ 0.48
LDB2O43679 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.07■□□□□ 0.48
LDB2O43679 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.07■□□□□ 0.48
LDB2O43679 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.07■□□□□ 0.48
LDB2O43679 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.07■□□□□ 0.48
LDB2O43679 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.07■□□□□ 0.48
LDB2O43679 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.07■□□□□ 0.48
LDB2O43679 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.07■□□□□ 0.48
LDB2O43679 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
LDB2O43679 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
LDB2O43679 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
LDB2O43679 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.07■□□□□ 0.48
LDB2O43679 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LDB2O43679 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
LDB2O43679 AC134043.2-201ENST00000624206 2238 ntBASIC18.07■□□□□ 0.48
LDB2O43679 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LDB2O43679 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LDB2O43679 AC005332.8-201ENST00000622750 2735 ntBASIC18.07■□□□□ 0.48
LDB2O43679 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
LDB2O43679 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LDB2O43679 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
LDB2O43679 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LDB2O43679 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
LDB2O43679 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.06■□□□□ 0.48
LDB2O43679 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.06■□□□□ 0.48
LDB2O43679 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LDB2O43679 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LDB2O43679 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.06■□□□□ 0.48
LDB2O43679 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
LDB2O43679 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.06■□□□□ 0.48
LDB2O43679 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.06■□□□□ 0.48
LDB2O43679 KRT18P65-201ENST00000439811 1286 ntBASIC18.06■□□□□ 0.48
LDB2O43679 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LDB2O43679 LINC01238-205ENST00000567549 1107 ntBASIC18.06■□□□□ 0.48
LDB2O43679 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.06■□□□□ 0.48
LDB2O43679 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.06■□□□□ 0.48
LDB2O43679 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.06■□□□□ 0.48
LDB2O43679 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
LDB2O43679 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LDB2O43679 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LDB2O43679 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LDB2O43679 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LDB2O43679 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LDB2O43679 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LDB2O43679 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
LDB2O43679 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LDB2O43679 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LDB2O43679 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LDB2O43679 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
LDB2O43679 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LDB2O43679 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LDB2O43679 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LDB2O43679 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LDB2O43679 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LDB2O43679 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LDB2O43679 AC006116.8-202ENST00000587620 1550 ntBASIC18.05■□□□□ 0.48
LDB2O43679 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LDB2O43679 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LDB2O43679 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
LDB2O43679 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
LDB2O43679 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
LDB2O43679 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.05■□□□□ 0.48
LDB2O43679 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LDB2O43679 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.05■□□□□ 0.48
LDB2O43679 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.05■□□□□ 0.48
LDB2O43679 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
LDB2O43679 RNF126P1-202ENST00000569893 925 ntBASIC18.05■□□□□ 0.48
LDB2O43679 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LDB2O43679 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.05■□□□□ 0.48
LDB2O43679 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.05■□□□□ 0.48
LDB2O43679 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.05■□□□□ 0.48
LDB2O43679 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
LDB2O43679 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LDB2O43679 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LDB2O43679 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LDB2O43679 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
LDB2O43679 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
LDB2O43679 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LDB2O43679 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LDB2O43679 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.04■□□□□ 0.48
LDB2O43679 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LDB2O43679 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
LDB2O43679 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
LDB2O43679 AC012317.2-201ENST00000623305 2251 ntBASIC18.04■□□□□ 0.48
LDB2O43679 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms