Protein–RNA interactions for Protein: O15118

NPC1, Niemann-Pick C1 protein, humanhuman

Predictions only

Length 1,278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1O15118 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
NPC1O15118 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NPC1O15118 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
NPC1O15118 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
NPC1O15118 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
NPC1O15118 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NPC1O15118 AC099343.3-201ENST00000605834 2503 ntBASIC18.17■□□□□ 0.5
NPC1O15118 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NPC1O15118 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NPC1O15118 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NPC1O15118 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.17■□□□□ 0.5
NPC1O15118 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
NPC1O15118 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.17■□□□□ 0.5
NPC1O15118 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
NPC1O15118 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.17■□□□□ 0.5
NPC1O15118 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.17■□□□□ 0.5
NPC1O15118 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.17■□□□□ 0.5
NPC1O15118 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.17■□□□□ 0.5
NPC1O15118 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NPC1O15118 AP001269.4-201ENST00000609611 512 ntBASIC18.17■□□□□ 0.5
NPC1O15118 AC120114.3-201ENST00000611923 658 ntBASIC18.17■□□□□ 0.5
NPC1O15118 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.17■□□□□ 0.5
NPC1O15118 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NPC1O15118 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
NPC1O15118 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NPC1O15118 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.17■□□□□ 0.5
NPC1O15118 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NPC1O15118 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPC1O15118 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
NPC1O15118 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPC1O15118 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.16■□□□□ 0.5
NPC1O15118 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPC1O15118 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.16■□□□□ 0.5
NPC1O15118 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.16■□□□□ 0.5
NPC1O15118 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NPC1O15118 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPC1O15118 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.16■□□□□ 0.5
NPC1O15118 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
NPC1O15118 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NPC1O15118 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPC1O15118 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NPC1O15118 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NPC1O15118 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.16■□□□□ 0.5
NPC1O15118 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPC1O15118 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.16■□□□□ 0.5
NPC1O15118 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.16■□□□□ 0.5
NPC1O15118 RNPS1P1-201ENST00000507437 918 ntBASIC18.16■□□□□ 0.5
NPC1O15118 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.16■□□□□ 0.5
NPC1O15118 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.16■□□□□ 0.5
NPC1O15118 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.16■□□□□ 0.5
NPC1O15118 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NPC1O15118 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.16■□□□□ 0.5
NPC1O15118 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.16■□□□□ 0.5
NPC1O15118 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPC1O15118 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.16■□□□□ 0.5
NPC1O15118 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPC1O15118 AC022898.2-201ENST00000616822 1312 ntBASIC18.16■□□□□ 0.5
NPC1O15118 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
NPC1O15118 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.16■□□□□ 0.5
NPC1O15118 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPC1O15118 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPC1O15118 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPC1O15118 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPC1O15118 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NPC1O15118 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.15■□□□□ 0.5
NPC1O15118 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
NPC1O15118 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
NPC1O15118 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NPC1O15118 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NPC1O15118 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NPC1O15118 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.15■□□□□ 0.5
NPC1O15118 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NPC1O15118 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NPC1O15118 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NPC1O15118 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.15■□□□□ 0.5
NPC1O15118 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NPC1O15118 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NPC1O15118 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
NPC1O15118 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.15■□□□□ 0.5
NPC1O15118 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.15■□□□□ 0.5
NPC1O15118 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NPC1O15118 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NPC1O15118 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.15■□□□□ 0.5
NPC1O15118 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NPC1O15118 AC096633.1-201ENST00000422446 749 ntBASIC18.15■□□□□ 0.5
NPC1O15118 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.15■□□□□ 0.5
NPC1O15118 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.15■□□□□ 0.5
NPC1O15118 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NPC1O15118 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.15■□□□□ 0.5
NPC1O15118 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
NPC1O15118 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.15■□□□□ 0.5
NPC1O15118 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NPC1O15118 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NPC1O15118 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NPC1O15118 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NPC1O15118 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NPC1O15118 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NPC1O15118 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NPC1O15118 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.14■□□□□ 0.5
NPC1O15118 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.14■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms