Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
O00370 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
O00370 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
O00370 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.26■□□□□ 0.67
O00370 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
O00370 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
O00370 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.26■□□□□ 0.67
O00370 AL645929.1-201ENST00000420084 975 ntBASIC19.26■□□□□ 0.67
O00370 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
O00370 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
O00370 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
O00370 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.26■□□□□ 0.67
O00370 AP003733.1-201ENST00000491725 852 ntBASIC19.26■□□□□ 0.67
O00370 FAM86EP-206ENST00000510506 987 ntBASIC19.26■□□□□ 0.67
O00370 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.26■□□□□ 0.67
O00370 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.26■□□□□ 0.67
O00370 RNF126P1-202ENST00000569893 925 ntBASIC19.26■□□□□ 0.67
O00370 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.26■□□□□ 0.67
O00370 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.26■□□□□ 0.67
O00370 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.26■□□□□ 0.67
O00370 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.26■□□□□ 0.67
O00370 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
O00370 AC132938.6-201ENST00000623828 1655 ntBASIC19.26■□□□□ 0.67
O00370 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
O00370 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.26■□□□□ 0.67
O00370 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
O00370 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
O00370 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.26■□□□□ 0.67
O00370 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
O00370 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.26■□□□□ 0.67
O00370 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
O00370 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
O00370 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
O00370 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
O00370 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.25■□□□□ 0.67
O00370 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
O00370 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
O00370 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.25■□□□□ 0.67
O00370 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.25■□□□□ 0.67
O00370 AC008764.6-201ENST00000595909 2069 ntBASIC19.25■□□□□ 0.67
O00370 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
O00370 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
O00370 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.25■□□□□ 0.67
O00370 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.25■□□□□ 0.67
O00370 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
O00370 IGHGP-201ENST00000390555 1178 ntBASIC19.25■□□□□ 0.67
O00370 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
O00370 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
O00370 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.25■□□□□ 0.67
O00370 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.25■□□□□ 0.67
O00370 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.25■□□□□ 0.67
O00370 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.25■□□□□ 0.67
O00370 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
O00370 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
O00370 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.25■□□□□ 0.67
O00370 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.25■□□□□ 0.67
O00370 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.25■□□□□ 0.67
O00370 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
O00370 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
O00370 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.25■□□□□ 0.67
O00370 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
O00370 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
O00370 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
O00370 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
O00370 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
O00370 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
O00370 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.25■□□□□ 0.67
O00370 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
O00370 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
O00370 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
O00370 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
O00370 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
O00370 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
O00370 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
O00370 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
O00370 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
O00370 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
O00370 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
O00370 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.24■□□□□ 0.67
O00370 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
O00370 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.24■□□□□ 0.67
O00370 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.24■□□□□ 0.67
O00370 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.24■□□□□ 0.67
O00370 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
O00370 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
O00370 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
O00370 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
O00370 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
O00370 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
O00370 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.24■□□□□ 0.67
O00370 AC005332.1-201ENST00000577698 1310 ntBASIC19.24■□□□□ 0.67
O00370 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.24■□□□□ 0.67
O00370 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
O00370 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
O00370 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
O00370 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.23■□□□□ 0.67
O00370 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
O00370 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.23■□□□□ 0.67
O00370 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
O00370 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms