Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
DUXBA0A1W2PPF3 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
DUXBA0A1W2PPF3 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
DUXBA0A1W2PPF3 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
DUXBA0A1W2PPF3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
DUXBA0A1W2PPF3 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
DUXBA0A1W2PPF3 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC14.76□□□□□ -0.05
DUXBA0A1W2PPF3 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
DUXBA0A1W2PPF3 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
DUXBA0A1W2PPF3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
DUXBA0A1W2PPF3 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
DUXBA0A1W2PPF3 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC14.76□□□□□ -0.05
DUXBA0A1W2PPF3 GAS7-202ENST00000396115 929 ntTSL 5 BASIC14.76□□□□□ -0.05
DUXBA0A1W2PPF3 GLI3-203ENST00000437480 451 ntTSL 2 BASIC14.76□□□□□ -0.05
DUXBA0A1W2PPF3 RPS2P4-201ENST00000476944 856 ntBASIC14.76□□□□□ -0.05
DUXBA0A1W2PPF3 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
DUXBA0A1W2PPF3 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC14.76□□□□□ -0.05
DUXBA0A1W2PPF3 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
DUXBA0A1W2PPF3 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC14.76□□□□□ -0.05
DUXBA0A1W2PPF3 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
DUXBA0A1W2PPF3 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
DUXBA0A1W2PPF3 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
DUXBA0A1W2PPF3 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
DUXBA0A1W2PPF3 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
DUXBA0A1W2PPF3 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC14.76□□□□□ -0.05
DUXBA0A1W2PPF3 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC14.76□□□□□ -0.05
DUXBA0A1W2PPF3 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
DUXBA0A1W2PPF3 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
DUXBA0A1W2PPF3 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
DUXBA0A1W2PPF3 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
DUXBA0A1W2PPF3 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
DUXBA0A1W2PPF3 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
DUXBA0A1W2PPF3 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
DUXBA0A1W2PPF3 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
DUXBA0A1W2PPF3 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC14.76□□□□□ -0.05
DUXBA0A1W2PPF3 AC022211.2-201ENST00000585075 2527 ntBASIC14.75□□□□□ -0.05
DUXBA0A1W2PPF3 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
DUXBA0A1W2PPF3 CROCCP1-201ENST00000426910 5675 ntBASIC14.75□□□□□ -0.05
DUXBA0A1W2PPF3 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
DUXBA0A1W2PPF3 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
DUXBA0A1W2PPF3 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC14.75□□□□□ -0.05
DUXBA0A1W2PPF3 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
DUXBA0A1W2PPF3 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
DUXBA0A1W2PPF3 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14.75□□□□□ -0.05
DUXBA0A1W2PPF3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC14.75□□□□□ -0.05
DUXBA0A1W2PPF3 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
DUXBA0A1W2PPF3 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
DUXBA0A1W2PPF3 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.75□□□□□ -0.05
DUXBA0A1W2PPF3 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
DUXBA0A1W2PPF3 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
DUXBA0A1W2PPF3 BUB3-202ENST00000368859 667 ntTSL 3 BASIC14.75□□□□□ -0.05
DUXBA0A1W2PPF3 SERF2-207ENST00000409614 582 ntTSL 2 BASIC14.75□□□□□ -0.05
DUXBA0A1W2PPF3 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
DUXBA0A1W2PPF3 PARL-206ENST00000435888 1098 ntTSL 5 BASIC14.75□□□□□ -0.05
DUXBA0A1W2PPF3 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC14.75□□□□□ -0.05
DUXBA0A1W2PPF3 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC14.75□□□□□ -0.05
DUXBA0A1W2PPF3 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
DUXBA0A1W2PPF3 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
DUXBA0A1W2PPF3 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
DUXBA0A1W2PPF3 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
DUXBA0A1W2PPF3 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
DUXBA0A1W2PPF3 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.75□□□□□ -0.05
DUXBA0A1W2PPF3 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
DUXBA0A1W2PPF3 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
DUXBA0A1W2PPF3 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.75□□□□□ -0.05
DUXBA0A1W2PPF3 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.75□□□□□ -0.05
DUXBA0A1W2PPF3 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
DUXBA0A1W2PPF3 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
DUXBA0A1W2PPF3 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
DUXBA0A1W2PPF3 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
DUXBA0A1W2PPF3 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
DUXBA0A1W2PPF3 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
DUXBA0A1W2PPF3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
DUXBA0A1W2PPF3 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
DUXBA0A1W2PPF3 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
DUXBA0A1W2PPF3 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
DUXBA0A1W2PPF3 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.75□□□□□ -0.05
DUXBA0A1W2PPF3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
DUXBA0A1W2PPF3 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
DUXBA0A1W2PPF3 HLA-J-201ENST00000462773 1622 ntBASIC14.74□□□□□ -0.05
DUXBA0A1W2PPF3 OR6D1P-203ENST00000641209 4860 ntBASIC14.74□□□□□ -0.05
DUXBA0A1W2PPF3 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
DUXBA0A1W2PPF3 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
DUXBA0A1W2PPF3 AC011676.5-201ENST00000624864 2660 ntBASIC14.74□□□□□ -0.05
DUXBA0A1W2PPF3 AC022898.2-201ENST00000616822 1312 ntBASIC14.74□□□□□ -0.05
DUXBA0A1W2PPF3 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
DUXBA0A1W2PPF3 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
DUXBA0A1W2PPF3 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
DUXBA0A1W2PPF3 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
DUXBA0A1W2PPF3 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
DUXBA0A1W2PPF3 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
DUXBA0A1W2PPF3 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
DUXBA0A1W2PPF3 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
DUXBA0A1W2PPF3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
DUXBA0A1W2PPF3 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
DUXBA0A1W2PPF3 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
DUXBA0A1W2PPF3 MAP2K4P1-201ENST00000438453 1195 ntBASIC14.74□□□□□ -0.05
DUXBA0A1W2PPF3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
DUXBA0A1W2PPF3 AC008040.2-201ENST00000461049 708 ntBASIC14.74□□□□□ -0.05
DUXBA0A1W2PPF3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms