Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLIC4Q9Y696 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.66■□□□□ 0.9
CLIC4Q9Y696 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLIC4Q9Y696 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.66■□□□□ 0.9
CLIC4Q9Y696 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.66■□□□□ 0.9
CLIC4Q9Y696 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLIC4Q9Y696 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CLIC4Q9Y696 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.66■□□□□ 0.9
CLIC4Q9Y696 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLIC4Q9Y696 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.66■□□□□ 0.9
CLIC4Q9Y696 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
CLIC4Q9Y696 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLIC4Q9Y696 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CLIC4Q9Y696 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC20.65■□□□□ 0.9
CLIC4Q9Y696 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.65■□□□□ 0.9
CLIC4Q9Y696 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CLIC4Q9Y696 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CLIC4Q9Y696 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLIC4Q9Y696 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLIC4Q9Y696 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLIC4Q9Y696 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLIC4Q9Y696 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLIC4Q9Y696 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLIC4Q9Y696 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.65■□□□□ 0.9
CLIC4Q9Y696 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
CLIC4Q9Y696 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.65■□□□□ 0.9
CLIC4Q9Y696 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLIC4Q9Y696 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.65■□□□□ 0.9
CLIC4Q9Y696 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.65■□□□□ 0.9
CLIC4Q9Y696 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.65■□□□□ 0.9
CLIC4Q9Y696 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.65■□□□□ 0.9
CLIC4Q9Y696 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.65■□□□□ 0.9
CLIC4Q9Y696 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLIC4Q9Y696 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLIC4Q9Y696 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.65■□□□□ 0.9
CLIC4Q9Y696 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLIC4Q9Y696 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLIC4Q9Y696 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
CLIC4Q9Y696 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLIC4Q9Y696 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLIC4Q9Y696 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CLIC4Q9Y696 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.64■□□□□ 0.9
CLIC4Q9Y696 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CLIC4Q9Y696 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CLIC4Q9Y696 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
CLIC4Q9Y696 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLIC4Q9Y696 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLIC4Q9Y696 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.64■□□□□ 0.89
CLIC4Q9Y696 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLIC4Q9Y696 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLIC4Q9Y696 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.64■□□□□ 0.89
CLIC4Q9Y696 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.64■□□□□ 0.89
CLIC4Q9Y696 LINC00602-201ENST00000629776 2065 ntBASIC20.64■□□□□ 0.89
CLIC4Q9Y696 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CLIC4Q9Y696 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.64■□□□□ 0.89
CLIC4Q9Y696 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLIC4Q9Y696 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLIC4Q9Y696 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLIC4Q9Y696 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CLIC4Q9Y696 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CLIC4Q9Y696 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLIC4Q9Y696 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLIC4Q9Y696 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.63■□□□□ 0.89
CLIC4Q9Y696 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLIC4Q9Y696 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLIC4Q9Y696 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLIC4Q9Y696 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CLIC4Q9Y696 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.63■□□□□ 0.89
CLIC4Q9Y696 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.63■□□□□ 0.89
CLIC4Q9Y696 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLIC4Q9Y696 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.63■□□□□ 0.89
CLIC4Q9Y696 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.63■□□□□ 0.89
CLIC4Q9Y696 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.63■□□□□ 0.89
CLIC4Q9Y696 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
CLIC4Q9Y696 AC079602.3-201ENST00000623931 403 ntBASIC20.63■□□□□ 0.89
CLIC4Q9Y696 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.63■□□□□ 0.89
CLIC4Q9Y696 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLIC4Q9Y696 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLIC4Q9Y696 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLIC4Q9Y696 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.63■□□□□ 0.89
CLIC4Q9Y696 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLIC4Q9Y696 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLIC4Q9Y696 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLIC4Q9Y696 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLIC4Q9Y696 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLIC4Q9Y696 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.62■□□□□ 0.89
CLIC4Q9Y696 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLIC4Q9Y696 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLIC4Q9Y696 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLIC4Q9Y696 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLIC4Q9Y696 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC20.62■□□□□ 0.89
CLIC4Q9Y696 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC20.62■□□□□ 0.89
CLIC4Q9Y696 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CLIC4Q9Y696 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CLIC4Q9Y696 AC139713.2-201ENST00000641328 2723 ntBASIC20.62■□□□□ 0.89
CLIC4Q9Y696 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLIC4Q9Y696 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLIC4Q9Y696 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLIC4Q9Y696 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CLIC4Q9Y696 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms