Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TSSC4Q9Y5U2 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TSSC4Q9Y5U2 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TSSC4Q9Y5U2 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TSSC4Q9Y5U2 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC14.17□□□□□ -0.14
TSSC4Q9Y5U2 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TSSC4Q9Y5U2 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TSSC4Q9Y5U2 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 LINC00167-201ENST00000530583 1419 ntBASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 HES2-202ENST00000377836 507 ntTSL 2 BASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 AC246785.2-201ENST00000432512 513 ntBASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 KRT18P31-201ENST00000506277 1292 ntBASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 AC099336.1-202ENST00000602961 463 ntBASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 GXYLT1P4-201ENST00000613576 1192 ntBASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 ANKRD20A8P-203ENST00000641373 517 ntBASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TSSC4Q9Y5U2 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TSSC4Q9Y5U2 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TSSC4Q9Y5U2 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TSSC4Q9Y5U2 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TSSC4Q9Y5U2 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TSSC4Q9Y5U2 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.15□□□□□ -0.14
TSSC4Q9Y5U2 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TSSC4Q9Y5U2 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TSSC4Q9Y5U2 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TSSC4Q9Y5U2 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TSSC4Q9Y5U2 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TSSC4Q9Y5U2 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TSSC4Q9Y5U2 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TSSC4Q9Y5U2 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC14.15□□□□□ -0.14
TSSC4Q9Y5U2 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TSSC4Q9Y5U2 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TSSC4Q9Y5U2 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
TSSC4Q9Y5U2 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC14.15□□□□□ -0.14
TSSC4Q9Y5U2 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TSSC4Q9Y5U2 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TSSC4Q9Y5U2 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TSSC4Q9Y5U2 MYLKP1-201ENST00000509077 1580 ntBASIC14.15□□□□□ -0.14
TSSC4Q9Y5U2 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
TSSC4Q9Y5U2 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC14.15□□□□□ -0.14
TSSC4Q9Y5U2 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TSSC4Q9Y5U2 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.15□□□□□ -0.14
TSSC4Q9Y5U2 RN7SL606P-201ENST00000472779 293 ntBASIC14.15□□□□□ -0.14
TSSC4Q9Y5U2 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.15□□□□□ -0.14
TSSC4Q9Y5U2 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.15□□□□□ -0.14
TSSC4Q9Y5U2 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.15□□□□□ -0.14
TSSC4Q9Y5U2 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.15□□□□□ -0.14
TSSC4Q9Y5U2 AC138894.3-201ENST00000603787 634 ntBASIC14.15□□□□□ -0.14
TSSC4Q9Y5U2 AL732292.2-201ENST00000609649 430 ntBASIC14.15□□□□□ -0.14
TSSC4Q9Y5U2 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TSSC4Q9Y5U2 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TSSC4Q9Y5U2 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.15□□□□□ -0.14
TSSC4Q9Y5U2 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TSSC4Q9Y5U2 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms