Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGB6Q9Y5F9 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHGB6Q9Y5F9 ATP5G2P1-201ENST00000433580 426 ntBASIC17.11■□□□□ 0.33
PCDHGB6Q9Y5F9 KRT18P48-201ENST00000434763 852 ntBASIC17.11■□□□□ 0.33
PCDHGB6Q9Y5F9 SPDYE13P-201ENST00000445314 798 ntBASIC17.11■□□□□ 0.33
PCDHGB6Q9Y5F9 SEC1P-202ENST00000473944 940 ntBASIC17.11■□□□□ 0.33
PCDHGB6Q9Y5F9 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHGB6Q9Y5F9 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.11■□□□□ 0.33
PCDHGB6Q9Y5F9 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.11■□□□□ 0.33
PCDHGB6Q9Y5F9 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHGB6Q9Y5F9 AC024243.1-201ENST00000609234 778 ntBASIC17.11■□□□□ 0.33
PCDHGB6Q9Y5F9 AC112497.1-201ENST00000624824 639 ntBASIC17.11■□□□□ 0.33
PCDHGB6Q9Y5F9 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDHGB6Q9Y5F9 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGB6Q9Y5F9 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGB6Q9Y5F9 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGB6Q9Y5F9 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHGB6Q9Y5F9 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGB6Q9Y5F9 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
PCDHGB6Q9Y5F9 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHGB6Q9Y5F9 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.11■□□□□ 0.33
PCDHGB6Q9Y5F9 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGB6Q9Y5F9 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGB6Q9Y5F9 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGB6Q9Y5F9 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGB6Q9Y5F9 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGB6Q9Y5F9 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHGB6Q9Y5F9 HEIH-201ENST00000623091 1652 ntBASIC17.1■□□□□ 0.33
PCDHGB6Q9Y5F9 AC009053.2-201ENST00000563701 2365 ntBASIC17.1■□□□□ 0.33
PCDHGB6Q9Y5F9 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PCDHGB6Q9Y5F9 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGB6Q9Y5F9 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHGB6Q9Y5F9 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PCDHGB6Q9Y5F9 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGB6Q9Y5F9 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDHGB6Q9Y5F9 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGB6Q9Y5F9 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGB6Q9Y5F9 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PCDHGB6Q9Y5F9 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGB6Q9Y5F9 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGB6Q9Y5F9 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDHGB6Q9Y5F9 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHGB6Q9Y5F9 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.1■□□□□ 0.33
PCDHGB6Q9Y5F9 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PCDHGB6Q9Y5F9 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.1■□□□□ 0.33
PCDHGB6Q9Y5F9 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PCDHGB6Q9Y5F9 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.1■□□□□ 0.33
PCDHGB6Q9Y5F9 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PCDHGB6Q9Y5F9 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.1■□□□□ 0.33
PCDHGB6Q9Y5F9 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PCDHGB6Q9Y5F9 AC068587.9-201ENST00000641814 219 ntBASIC17.1■□□□□ 0.33
PCDHGB6Q9Y5F9 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGB6Q9Y5F9 HOXB1-202ENST00000577092 1414 ntBASIC17.1■□□□□ 0.33
PCDHGB6Q9Y5F9 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHGB6Q9Y5F9 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PCDHGB6Q9Y5F9 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGB6Q9Y5F9 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGB6Q9Y5F9 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDHGB6Q9Y5F9 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGB6Q9Y5F9 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGB6Q9Y5F9 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDHGB6Q9Y5F9 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGB6Q9Y5F9 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB6Q9Y5F9 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB6Q9Y5F9 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
PCDHGB6Q9Y5F9 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB6Q9Y5F9 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDHGB6Q9Y5F9 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB6Q9Y5F9 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PCDHGB6Q9Y5F9 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PCDHGB6Q9Y5F9 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB6Q9Y5F9 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PCDHGB6Q9Y5F9 AL645929.1-201ENST00000420084 975 ntBASIC17.09■□□□□ 0.33
PCDHGB6Q9Y5F9 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHGB6Q9Y5F9 KRT126P-201ENST00000549467 1181 ntBASIC17.09■□□□□ 0.33
PCDHGB6Q9Y5F9 AC093458.2-201ENST00000623150 629 ntBASIC17.09■□□□□ 0.33
PCDHGB6Q9Y5F9 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDHGB6Q9Y5F9 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.09■□□□□ 0.33
PCDHGB6Q9Y5F9 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB6Q9Y5F9 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB6Q9Y5F9 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB6Q9Y5F9 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
PCDHGB6Q9Y5F9 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB6Q9Y5F9 AL512353.2-201ENST00000448759 1962 ntBASIC17.09■□□□□ 0.33
PCDHGB6Q9Y5F9 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB6Q9Y5F9 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB6Q9Y5F9 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
PCDHGB6Q9Y5F9 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB6Q9Y5F9 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHGB6Q9Y5F9 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB6Q9Y5F9 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHGB6Q9Y5F9 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHGB6Q9Y5F9 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHGB6Q9Y5F9 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
PCDHGB6Q9Y5F9 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHGB6Q9Y5F9 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHGB6Q9Y5F9 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHGB6Q9Y5F9 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
PCDHGB6Q9Y5F9 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.33
PCDHGB6Q9Y5F9 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms