Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRCH1Q9Y2L9 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.22■□□□□ 0.35
LRCH1Q9Y2L9 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LRCH1Q9Y2L9 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRCH1Q9Y2L9 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRCH1Q9Y2L9 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRCH1Q9Y2L9 AC026691.1-201ENST00000602502 2017 ntBASIC17.22■□□□□ 0.35
LRCH1Q9Y2L9 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRCH1Q9Y2L9 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.22■□□□□ 0.35
LRCH1Q9Y2L9 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.22■□□□□ 0.35
LRCH1Q9Y2L9 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.22■□□□□ 0.35
LRCH1Q9Y2L9 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.22■□□□□ 0.35
LRCH1Q9Y2L9 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.22■□□□□ 0.35
LRCH1Q9Y2L9 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.22■□□□□ 0.35
LRCH1Q9Y2L9 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.22■□□□□ 0.35
LRCH1Q9Y2L9 MIR4758-201ENST00000577688 71 ntBASIC17.22■□□□□ 0.35
LRCH1Q9Y2L9 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
LRCH1Q9Y2L9 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRCH1Q9Y2L9 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRCH1Q9Y2L9 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRCH1Q9Y2L9 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.22■□□□□ 0.35
LRCH1Q9Y2L9 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
LRCH1Q9Y2L9 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRCH1Q9Y2L9 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRCH1Q9Y2L9 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.22■□□□□ 0.35
LRCH1Q9Y2L9 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRCH1Q9Y2L9 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.22■□□□□ 0.35
LRCH1Q9Y2L9 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
LRCH1Q9Y2L9 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
LRCH1Q9Y2L9 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRCH1Q9Y2L9 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRCH1Q9Y2L9 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRCH1Q9Y2L9 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
LRCH1Q9Y2L9 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
LRCH1Q9Y2L9 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LRCH1Q9Y2L9 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRCH1Q9Y2L9 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LRCH1Q9Y2L9 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRCH1Q9Y2L9 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRCH1Q9Y2L9 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LRCH1Q9Y2L9 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.21■□□□□ 0.35
LRCH1Q9Y2L9 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRCH1Q9Y2L9 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.21■□□□□ 0.35
LRCH1Q9Y2L9 AC124283.5-201ENST00000624661 1809 ntBASIC17.21■□□□□ 0.35
LRCH1Q9Y2L9 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRCH1Q9Y2L9 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRCH1Q9Y2L9 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRCH1Q9Y2L9 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
LRCH1Q9Y2L9 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRCH1Q9Y2L9 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRCH1Q9Y2L9 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRCH1Q9Y2L9 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRCH1Q9Y2L9 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.21■□□□□ 0.35
LRCH1Q9Y2L9 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.21■□□□□ 0.35
LRCH1Q9Y2L9 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRCH1Q9Y2L9 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRCH1Q9Y2L9 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRCH1Q9Y2L9 AC073210.2-201ENST00000430369 194 ntBASIC17.21■□□□□ 0.35
LRCH1Q9Y2L9 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
LRCH1Q9Y2L9 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.21■□□□□ 0.35
LRCH1Q9Y2L9 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.21■□□□□ 0.35
LRCH1Q9Y2L9 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRCH1Q9Y2L9 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.21■□□□□ 0.35
LRCH1Q9Y2L9 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
LRCH1Q9Y2L9 AC133041.1-202ENST00000642053 222 ntBASIC17.21■□□□□ 0.35
LRCH1Q9Y2L9 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LRCH1Q9Y2L9 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRCH1Q9Y2L9 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRCH1Q9Y2L9 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRCH1Q9Y2L9 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LRCH1Q9Y2L9 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRCH1Q9Y2L9 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRCH1Q9Y2L9 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
LRCH1Q9Y2L9 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.21■□□□□ 0.34
LRCH1Q9Y2L9 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
LRCH1Q9Y2L9 AL603756.1-201ENST00000606511 2163 ntBASIC17.21■□□□□ 0.34
LRCH1Q9Y2L9 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
LRCH1Q9Y2L9 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
LRCH1Q9Y2L9 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRCH1Q9Y2L9 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.2■□□□□ 0.34
LRCH1Q9Y2L9 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRCH1Q9Y2L9 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRCH1Q9Y2L9 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRCH1Q9Y2L9 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRCH1Q9Y2L9 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.2■□□□□ 0.34
LRCH1Q9Y2L9 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.2■□□□□ 0.34
LRCH1Q9Y2L9 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.2■□□□□ 0.34
LRCH1Q9Y2L9 TSPY21P-201ENST00000433481 731 ntBASIC17.2■□□□□ 0.34
LRCH1Q9Y2L9 AC069152.1-201ENST00000438030 544 ntBASIC17.2■□□□□ 0.34
LRCH1Q9Y2L9 AC093787.1-201ENST00000450396 207 ntBASIC17.2■□□□□ 0.34
LRCH1Q9Y2L9 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.2■□□□□ 0.34
LRCH1Q9Y2L9 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.2■□□□□ 0.34
LRCH1Q9Y2L9 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.2■□□□□ 0.34
LRCH1Q9Y2L9 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.2■□□□□ 0.34
LRCH1Q9Y2L9 AL138781.1-201ENST00000566567 1274 ntBASIC17.2■□□□□ 0.34
LRCH1Q9Y2L9 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.2■□□□□ 0.34
LRCH1Q9Y2L9 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
LRCH1Q9Y2L9 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRCH1Q9Y2L9 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRCH1Q9Y2L9 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 157.3 ms