Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CNOT11Q9UKZ1 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNOT11Q9UKZ1 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CNOT11Q9UKZ1 AC011676.5-201ENST00000624864 2660 ntBASIC17.4■□□□□ 0.38
CNOT11Q9UKZ1 AC022211.2-201ENST00000585075 2527 ntBASIC17.4■□□□□ 0.38
CNOT11Q9UKZ1 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CNOT11Q9UKZ1 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNOT11Q9UKZ1 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.39■□□□□ 0.38
CNOT11Q9UKZ1 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.38
CNOT11Q9UKZ1 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CNOT11Q9UKZ1 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CNOT11Q9UKZ1 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT11Q9UKZ1 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT11Q9UKZ1 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.39■□□□□ 0.37
CNOT11Q9UKZ1 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT11Q9UKZ1 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CNOT11Q9UKZ1 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.39■□□□□ 0.37
CNOT11Q9UKZ1 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.39■□□□□ 0.37
CNOT11Q9UKZ1 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.39■□□□□ 0.37
CNOT11Q9UKZ1 KRT18P21-201ENST00000515767 1272 ntBASIC17.39■□□□□ 0.37
CNOT11Q9UKZ1 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
CNOT11Q9UKZ1 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.39■□□□□ 0.37
CNOT11Q9UKZ1 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT11Q9UKZ1 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.39■□□□□ 0.37
CNOT11Q9UKZ1 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.39■□□□□ 0.37
CNOT11Q9UKZ1 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT11Q9UKZ1 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT11Q9UKZ1 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.39■□□□□ 0.37
CNOT11Q9UKZ1 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.39■□□□□ 0.37
CNOT11Q9UKZ1 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT11Q9UKZ1 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT11Q9UKZ1 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT11Q9UKZ1 AL023806.1-201ENST00000603994 1649 ntBASIC17.39■□□□□ 0.37
CNOT11Q9UKZ1 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.39■□□□□ 0.37
CNOT11Q9UKZ1 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT11Q9UKZ1 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.39■□□□□ 0.37
CNOT11Q9UKZ1 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT11Q9UKZ1 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT11Q9UKZ1 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.38■□□□□ 0.37
CNOT11Q9UKZ1 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT11Q9UKZ1 AC008556.1-201ENST00000610908 2040 ntBASIC17.38■□□□□ 0.37
CNOT11Q9UKZ1 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT11Q9UKZ1 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT11Q9UKZ1 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT11Q9UKZ1 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.38■□□□□ 0.37
CNOT11Q9UKZ1 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.38■□□□□ 0.37
CNOT11Q9UKZ1 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT11Q9UKZ1 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT11Q9UKZ1 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.38■□□□□ 0.37
CNOT11Q9UKZ1 AP001094.4-201ENST00000579008 2176 ntBASIC17.38■□□□□ 0.37
CNOT11Q9UKZ1 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT11Q9UKZ1 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CNOT11Q9UKZ1 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
CNOT11Q9UKZ1 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.38■□□□□ 0.37
CNOT11Q9UKZ1 TERF1P1-201ENST00000311003 1181 ntBASIC17.38■□□□□ 0.37
CNOT11Q9UKZ1 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT11Q9UKZ1 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CNOT11Q9UKZ1 HMGA1P5-201ENST00000412453 271 ntBASIC17.38■□□□□ 0.37
CNOT11Q9UKZ1 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.38■□□□□ 0.37
CNOT11Q9UKZ1 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.38■□□□□ 0.37
CNOT11Q9UKZ1 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CNOT11Q9UKZ1 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT11Q9UKZ1 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.38■□□□□ 0.37
CNOT11Q9UKZ1 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CNOT11Q9UKZ1 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
CNOT11Q9UKZ1 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CNOT11Q9UKZ1 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.38■□□□□ 0.37
CNOT11Q9UKZ1 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.38■□□□□ 0.37
CNOT11Q9UKZ1 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT11Q9UKZ1 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT11Q9UKZ1 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CNOT11Q9UKZ1 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT11Q9UKZ1 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT11Q9UKZ1 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.38■□□□□ 0.37
CNOT11Q9UKZ1 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT11Q9UKZ1 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT11Q9UKZ1 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT11Q9UKZ1 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT11Q9UKZ1 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
CNOT11Q9UKZ1 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.37■□□□□ 0.37
CNOT11Q9UKZ1 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT11Q9UKZ1 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.37■□□□□ 0.37
CNOT11Q9UKZ1 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT11Q9UKZ1 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.37■□□□□ 0.37
CNOT11Q9UKZ1 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT11Q9UKZ1 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT11Q9UKZ1 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CNOT11Q9UKZ1 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT11Q9UKZ1 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT11Q9UKZ1 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.37■□□□□ 0.37
CNOT11Q9UKZ1 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.37■□□□□ 0.37
CNOT11Q9UKZ1 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT11Q9UKZ1 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.37■□□□□ 0.37
CNOT11Q9UKZ1 AL137013.1-201ENST00000432946 1228 ntBASIC17.37■□□□□ 0.37
CNOT11Q9UKZ1 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CNOT11Q9UKZ1 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT11Q9UKZ1 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.37■□□□□ 0.37
CNOT11Q9UKZ1 AC010203.1-204ENST00000548782 407 ntBASIC17.37■□□□□ 0.37
CNOT11Q9UKZ1 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT11Q9UKZ1 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms