Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.3■□□□□ 0.36
NIPSNAP3AQ9UFN0 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NIPSNAP3AQ9UFN0 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.3■□□□□ 0.36
NIPSNAP3AQ9UFN0 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
NIPSNAP3AQ9UFN0 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NIPSNAP3AQ9UFN0 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NIPSNAP3AQ9UFN0 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NIPSNAP3AQ9UFN0 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.3■□□□□ 0.36
NIPSNAP3AQ9UFN0 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.3■□□□□ 0.36
NIPSNAP3AQ9UFN0 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NIPSNAP3AQ9UFN0 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
NIPSNAP3AQ9UFN0 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NIPSNAP3AQ9UFN0 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NIPSNAP3AQ9UFN0 MIR149-201ENST00000384879 89 ntBASIC17.3■□□□□ 0.36
NIPSNAP3AQ9UFN0 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
NIPSNAP3AQ9UFN0 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
NIPSNAP3AQ9UFN0 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.3■□□□□ 0.36
NIPSNAP3AQ9UFN0 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NIPSNAP3AQ9UFN0 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.3■□□□□ 0.36
NIPSNAP3AQ9UFN0 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.3■□□□□ 0.36
NIPSNAP3AQ9UFN0 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
NIPSNAP3AQ9UFN0 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.3■□□□□ 0.36
NIPSNAP3AQ9UFN0 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.3■□□□□ 0.36
NIPSNAP3AQ9UFN0 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.3■□□□□ 0.36
NIPSNAP3AQ9UFN0 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NIPSNAP3AQ9UFN0 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.3■□□□□ 0.36
NIPSNAP3AQ9UFN0 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.3■□□□□ 0.36
NIPSNAP3AQ9UFN0 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
NIPSNAP3AQ9UFN0 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NIPSNAP3AQ9UFN0 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
NIPSNAP3AQ9UFN0 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.3■□□□□ 0.36
NIPSNAP3AQ9UFN0 SIRPAP1-201ENST00000448467 1770 ntBASIC17.3■□□□□ 0.36
NIPSNAP3AQ9UFN0 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NIPSNAP3AQ9UFN0 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
NIPSNAP3AQ9UFN0 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NIPSNAP3AQ9UFN0 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
NIPSNAP3AQ9UFN0 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NIPSNAP3AQ9UFN0 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NIPSNAP3AQ9UFN0 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NIPSNAP3AQ9UFN0 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NIPSNAP3AQ9UFN0 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NIPSNAP3AQ9UFN0 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NIPSNAP3AQ9UFN0 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.29■□□□□ 0.36
NIPSNAP3AQ9UFN0 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NIPSNAP3AQ9UFN0 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NIPSNAP3AQ9UFN0 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NIPSNAP3AQ9UFN0 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.29■□□□□ 0.36
NIPSNAP3AQ9UFN0 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NIPSNAP3AQ9UFN0 AC106820.2-201ENST00000563775 3264 ntBASIC17.29■□□□□ 0.36
NIPSNAP3AQ9UFN0 PRORSD1P-202ENST00000563365 2154 ntBASIC17.29■□□□□ 0.36
NIPSNAP3AQ9UFN0 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NIPSNAP3AQ9UFN0 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.29■□□□□ 0.36
NIPSNAP3AQ9UFN0 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.29■□□□□ 0.36
NIPSNAP3AQ9UFN0 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.29■□□□□ 0.36
NIPSNAP3AQ9UFN0 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NIPSNAP3AQ9UFN0 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NIPSNAP3AQ9UFN0 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.29■□□□□ 0.36
NIPSNAP3AQ9UFN0 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NIPSNAP3AQ9UFN0 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.29■□□□□ 0.36
NIPSNAP3AQ9UFN0 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NIPSNAP3AQ9UFN0 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.29■□□□□ 0.36
NIPSNAP3AQ9UFN0 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.29■□□□□ 0.36
NIPSNAP3AQ9UFN0 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.29■□□□□ 0.36
NIPSNAP3AQ9UFN0 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.29■□□□□ 0.36
NIPSNAP3AQ9UFN0 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
NIPSNAP3AQ9UFN0 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.29■□□□□ 0.36
NIPSNAP3AQ9UFN0 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.29■□□□□ 0.36
NIPSNAP3AQ9UFN0 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NIPSNAP3AQ9UFN0 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NIPSNAP3AQ9UFN0 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
NIPSNAP3AQ9UFN0 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
NIPSNAP3AQ9UFN0 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
NIPSNAP3AQ9UFN0 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NIPSNAP3AQ9UFN0 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
NIPSNAP3AQ9UFN0 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
NIPSNAP3AQ9UFN0 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
NIPSNAP3AQ9UFN0 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
NIPSNAP3AQ9UFN0 AC036111.1-201ENST00000533973 1582 ntBASIC17.28■□□□□ 0.36
NIPSNAP3AQ9UFN0 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.28■□□□□ 0.36
NIPSNAP3AQ9UFN0 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NIPSNAP3AQ9UFN0 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NIPSNAP3AQ9UFN0 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NIPSNAP3AQ9UFN0 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.28■□□□□ 0.36
NIPSNAP3AQ9UFN0 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.28■□□□□ 0.36
NIPSNAP3AQ9UFN0 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NIPSNAP3AQ9UFN0 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
NIPSNAP3AQ9UFN0 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NIPSNAP3AQ9UFN0 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
NIPSNAP3AQ9UFN0 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.28■□□□□ 0.36
NIPSNAP3AQ9UFN0 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NIPSNAP3AQ9UFN0 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.28■□□□□ 0.36
NIPSNAP3AQ9UFN0 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.28■□□□□ 0.36
NIPSNAP3AQ9UFN0 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
NIPSNAP3AQ9UFN0 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.28■□□□□ 0.36
NIPSNAP3AQ9UFN0 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.28■□□□□ 0.36
NIPSNAP3AQ9UFN0 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.28■□□□□ 0.36
NIPSNAP3AQ9UFN0 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.28■□□□□ 0.36
NIPSNAP3AQ9UFN0 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.28■□□□□ 0.36
NIPSNAP3AQ9UFN0 CD177P1-201ENST00000606252 935 ntBASIC17.28■□□□□ 0.36
NIPSNAP3AQ9UFN0 DGCR10-201ENST00000609839 495 ntBASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms