Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
HACD3Q9P035 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HACD3Q9P035 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
HACD3Q9P035 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HACD3Q9P035 HLA-F-220ENST00000434407 884 ntBASIC18.31■□□□□ 0.52
HACD3Q9P035 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.31■□□□□ 0.52
HACD3Q9P035 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.31■□□□□ 0.52
HACD3Q9P035 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.31■□□□□ 0.52
HACD3Q9P035 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.31■□□□□ 0.52
HACD3Q9P035 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
HACD3Q9P035 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HACD3Q9P035 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
HACD3Q9P035 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.31■□□□□ 0.52
HACD3Q9P035 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HACD3Q9P035 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HACD3Q9P035 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.31■□□□□ 0.52
HACD3Q9P035 LINC01126-201ENST00000623515 1646 ntBASIC18.31■□□□□ 0.52
HACD3Q9P035 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
HACD3Q9P035 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
HACD3Q9P035 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
HACD3Q9P035 AP000997.3-201ENST00000623333 2250 ntBASIC18.3■□□□□ 0.52
HACD3Q9P035 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HACD3Q9P035 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.3■□□□□ 0.52
HACD3Q9P035 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HACD3Q9P035 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
HACD3Q9P035 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HACD3Q9P035 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HACD3Q9P035 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HACD3Q9P035 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HACD3Q9P035 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.3■□□□□ 0.52
HACD3Q9P035 AL359075.1-203ENST00000462729 1002 ntBASIC18.3■□□□□ 0.52
HACD3Q9P035 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HACD3Q9P035 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
HACD3Q9P035 AC079602.3-201ENST00000623931 403 ntBASIC18.3■□□□□ 0.52
HACD3Q9P035 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.3■□□□□ 0.52
HACD3Q9P035 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.3■□□□□ 0.52
HACD3Q9P035 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
HACD3Q9P035 AC005332.8-201ENST00000622750 2735 ntBASIC18.3■□□□□ 0.52
HACD3Q9P035 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HACD3Q9P035 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HACD3Q9P035 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HACD3Q9P035 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HACD3Q9P035 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HACD3Q9P035 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HACD3Q9P035 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
HACD3Q9P035 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HACD3Q9P035 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HACD3Q9P035 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HACD3Q9P035 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.3■□□□□ 0.52
HACD3Q9P035 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.29■□□□□ 0.52
HACD3Q9P035 AC099343.3-201ENST00000605834 2503 ntBASIC18.29■□□□□ 0.52
HACD3Q9P035 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HACD3Q9P035 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HACD3Q9P035 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.29■□□□□ 0.52
HACD3Q9P035 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
HACD3Q9P035 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.29■□□□□ 0.52
HACD3Q9P035 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
HACD3Q9P035 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.29■□□□□ 0.52
HACD3Q9P035 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
HACD3Q9P035 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HACD3Q9P035 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HACD3Q9P035 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HACD3Q9P035 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HACD3Q9P035 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
HACD3Q9P035 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HACD3Q9P035 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.29■□□□□ 0.52
HACD3Q9P035 KRT18P38-201ENST00000449496 1282 ntBASIC18.29■□□□□ 0.52
HACD3Q9P035 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.29■□□□□ 0.52
HACD3Q9P035 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.29■□□□□ 0.52
HACD3Q9P035 AC024563.2-201ENST00000603282 481 ntBASIC18.29■□□□□ 0.52
HACD3Q9P035 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.29■□□□□ 0.52
HACD3Q9P035 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HACD3Q9P035 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HACD3Q9P035 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HACD3Q9P035 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HACD3Q9P035 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.29■□□□□ 0.52
HACD3Q9P035 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
HACD3Q9P035 PHGDH-209ENST00000641074 1780 ntBASIC18.29■□□□□ 0.52
HACD3Q9P035 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
HACD3Q9P035 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HACD3Q9P035 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HACD3Q9P035 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HACD3Q9P035 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HACD3Q9P035 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
HACD3Q9P035 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HACD3Q9P035 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
HACD3Q9P035 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HACD3Q9P035 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HACD3Q9P035 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HACD3Q9P035 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HACD3Q9P035 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.28■□□□□ 0.52
HACD3Q9P035 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
HACD3Q9P035 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.28■□□□□ 0.52
HACD3Q9P035 AC068880.1-201ENST00000507289 2297 ntBASIC18.28■□□□□ 0.52
HACD3Q9P035 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HACD3Q9P035 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HACD3Q9P035 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HACD3Q9P035 AC112907.2-201ENST00000448639 330 ntBASIC18.28■□□□□ 0.52
HACD3Q9P035 AC113404.2-201ENST00000507884 177 ntBASIC18.28■□□□□ 0.52
HACD3Q9P035 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms