Protein–RNA interactions for Protein: Q9NXL2

ARHGEF38, Rho guanine nucleotide exchange factor 38, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF38Q9NXL2 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.82■□□□□ 0.6
ARHGEF38Q9NXL2 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ARHGEF38Q9NXL2 Z83836.1-201ENST00000624605 1642 ntBASIC18.82■□□□□ 0.6
ARHGEF38Q9NXL2 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ARHGEF38Q9NXL2 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.81■□□□□ 0.6
ARHGEF38Q9NXL2 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.81■□□□□ 0.6
ARHGEF38Q9NXL2 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ARHGEF38Q9NXL2 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
ARHGEF38Q9NXL2 AL096828.2-201ENST00000567259 1965 ntBASIC18.81■□□□□ 0.6
ARHGEF38Q9NXL2 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ARHGEF38Q9NXL2 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ARHGEF38Q9NXL2 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ARHGEF38Q9NXL2 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.81■□□□□ 0.6
ARHGEF38Q9NXL2 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.81■□□□□ 0.6
ARHGEF38Q9NXL2 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.81■□□□□ 0.6
ARHGEF38Q9NXL2 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ARHGEF38Q9NXL2 AC091076.1-201ENST00000610741 619 ntBASIC18.81■□□□□ 0.6
ARHGEF38Q9NXL2 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ARHGEF38Q9NXL2 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.81■□□□□ 0.6
ARHGEF38Q9NXL2 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ARHGEF38Q9NXL2 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ARHGEF38Q9NXL2 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ARHGEF38Q9NXL2 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ARHGEF38Q9NXL2 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
ARHGEF38Q9NXL2 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ARHGEF38Q9NXL2 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ARHGEF38Q9NXL2 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ARHGEF38Q9NXL2 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ARHGEF38Q9NXL2 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ARHGEF38Q9NXL2 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ARHGEF38Q9NXL2 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ARHGEF38Q9NXL2 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ARHGEF38Q9NXL2 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ARHGEF38Q9NXL2 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.8■□□□□ 0.6
ARHGEF38Q9NXL2 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.8■□□□□ 0.6
ARHGEF38Q9NXL2 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ARHGEF38Q9NXL2 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.8■□□□□ 0.6
ARHGEF38Q9NXL2 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ARHGEF38Q9NXL2 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
ARHGEF38Q9NXL2 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ARHGEF38Q9NXL2 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
ARHGEF38Q9NXL2 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ARHGEF38Q9NXL2 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.8■□□□□ 0.6
ARHGEF38Q9NXL2 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.8■□□□□ 0.6
ARHGEF38Q9NXL2 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ARHGEF38Q9NXL2 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.8■□□□□ 0.6
ARHGEF38Q9NXL2 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.8■□□□□ 0.6
ARHGEF38Q9NXL2 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.8■□□□□ 0.6
ARHGEF38Q9NXL2 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
ARHGEF38Q9NXL2 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ARHGEF38Q9NXL2 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ARHGEF38Q9NXL2 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.8■□□□□ 0.6
ARHGEF38Q9NXL2 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ARHGEF38Q9NXL2 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ARHGEF38Q9NXL2 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ARHGEF38Q9NXL2 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ARHGEF38Q9NXL2 AL353692.3-201ENST00000407031 1396 ntBASIC18.8■□□□□ 0.6
ARHGEF38Q9NXL2 AC135050.7-201ENST00000624508 2218 ntBASIC18.8■□□□□ 0.6
ARHGEF38Q9NXL2 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
ARHGEF38Q9NXL2 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARHGEF38Q9NXL2 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ARHGEF38Q9NXL2 AC132938.6-201ENST00000623828 1655 ntBASIC18.79■□□□□ 0.6
ARHGEF38Q9NXL2 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.79■□□□□ 0.6
ARHGEF38Q9NXL2 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.79■□□□□ 0.6
ARHGEF38Q9NXL2 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARHGEF38Q9NXL2 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARHGEF38Q9NXL2 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARHGEF38Q9NXL2 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARHGEF38Q9NXL2 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
ARHGEF38Q9NXL2 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARHGEF38Q9NXL2 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ARHGEF38Q9NXL2 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARHGEF38Q9NXL2 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARHGEF38Q9NXL2 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARHGEF38Q9NXL2 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
ARHGEF38Q9NXL2 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARHGEF38Q9NXL2 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ARHGEF38Q9NXL2 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.79■□□□□ 0.6
ARHGEF38Q9NXL2 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.79■□□□□ 0.6
ARHGEF38Q9NXL2 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.79■□□□□ 0.6
ARHGEF38Q9NXL2 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.79■□□□□ 0.6
ARHGEF38Q9NXL2 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ARHGEF38Q9NXL2 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ARHGEF38Q9NXL2 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARHGEF38Q9NXL2 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
ARHGEF38Q9NXL2 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARHGEF38Q9NXL2 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARHGEF38Q9NXL2 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
ARHGEF38Q9NXL2 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ARHGEF38Q9NXL2 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.79■□□□□ 0.6
ARHGEF38Q9NXL2 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ARHGEF38Q9NXL2 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
ARHGEF38Q9NXL2 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARHGEF38Q9NXL2 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ARHGEF38Q9NXL2 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ARHGEF38Q9NXL2 LINC00602-201ENST00000629776 2065 ntBASIC18.78■□□□□ 0.6
ARHGEF38Q9NXL2 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ARHGEF38Q9NXL2 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ARHGEF38Q9NXL2 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARHGEF38Q9NXL2 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms