Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HPF1Q9NWY4 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HPF1Q9NWY4 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HPF1Q9NWY4 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HPF1Q9NWY4 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HPF1Q9NWY4 AL031598.1-201ENST00000561511 1773 ntBASIC16.79■□□□□ 0.28
HPF1Q9NWY4 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HPF1Q9NWY4 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.79■□□□□ 0.28
HPF1Q9NWY4 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HPF1Q9NWY4 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HPF1Q9NWY4 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HPF1Q9NWY4 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
HPF1Q9NWY4 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.78■□□□□ 0.28
HPF1Q9NWY4 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.78■□□□□ 0.28
HPF1Q9NWY4 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
HPF1Q9NWY4 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HPF1Q9NWY4 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
HPF1Q9NWY4 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.78■□□□□ 0.28
HPF1Q9NWY4 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HPF1Q9NWY4 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.78■□□□□ 0.28
HPF1Q9NWY4 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.78■□□□□ 0.28
HPF1Q9NWY4 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.78■□□□□ 0.28
HPF1Q9NWY4 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HPF1Q9NWY4 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.78■□□□□ 0.28
HPF1Q9NWY4 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.78■□□□□ 0.28
HPF1Q9NWY4 AC090616.6-201ENST00000582640 721 ntBASIC16.78■□□□□ 0.28
HPF1Q9NWY4 IGHV3-41-201ENST00000613121 348 ntBASIC16.78■□□□□ 0.28
HPF1Q9NWY4 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HPF1Q9NWY4 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HPF1Q9NWY4 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HPF1Q9NWY4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HPF1Q9NWY4 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HPF1Q9NWY4 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.78■□□□□ 0.28
HPF1Q9NWY4 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HPF1Q9NWY4 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HPF1Q9NWY4 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
HPF1Q9NWY4 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HPF1Q9NWY4 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.78■□□□□ 0.28
HPF1Q9NWY4 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HPF1Q9NWY4 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
HPF1Q9NWY4 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
HPF1Q9NWY4 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HPF1Q9NWY4 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HPF1Q9NWY4 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HPF1Q9NWY4 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HPF1Q9NWY4 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.77■□□□□ 0.28
HPF1Q9NWY4 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.77■□□□□ 0.28
HPF1Q9NWY4 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HPF1Q9NWY4 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
HPF1Q9NWY4 AP002383.4-201ENST00000442518 975 ntBASIC16.77■□□□□ 0.28
HPF1Q9NWY4 GUSBP12-201ENST00000513727 720 ntBASIC16.77■□□□□ 0.28
HPF1Q9NWY4 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.77■□□□□ 0.28
HPF1Q9NWY4 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.77■□□□□ 0.28
HPF1Q9NWY4 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.77■□□□□ 0.28
HPF1Q9NWY4 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.77■□□□□ 0.28
HPF1Q9NWY4 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.77■□□□□ 0.28
HPF1Q9NWY4 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.77■□□□□ 0.27
HPF1Q9NWY4 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
HPF1Q9NWY4 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
HPF1Q9NWY4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.77■□□□□ 0.27
HPF1Q9NWY4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
HPF1Q9NWY4 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.77■□□□□ 0.27
HPF1Q9NWY4 AL353692.3-201ENST00000407031 1396 ntBASIC16.77■□□□□ 0.27
HPF1Q9NWY4 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
HPF1Q9NWY4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HPF1Q9NWY4 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
HPF1Q9NWY4 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.76■□□□□ 0.27
HPF1Q9NWY4 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HPF1Q9NWY4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
HPF1Q9NWY4 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HPF1Q9NWY4 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HPF1Q9NWY4 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.76■□□□□ 0.27
HPF1Q9NWY4 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
HPF1Q9NWY4 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.76■□□□□ 0.27
HPF1Q9NWY4 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.76■□□□□ 0.27
HPF1Q9NWY4 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HPF1Q9NWY4 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.76■□□□□ 0.27
HPF1Q9NWY4 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
HPF1Q9NWY4 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.76■□□□□ 0.27
HPF1Q9NWY4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.76■□□□□ 0.27
HPF1Q9NWY4 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
HPF1Q9NWY4 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
HPF1Q9NWY4 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HPF1Q9NWY4 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HPF1Q9NWY4 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HPF1Q9NWY4 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HPF1Q9NWY4 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HPF1Q9NWY4 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.76■□□□□ 0.27
HPF1Q9NWY4 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HPF1Q9NWY4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HPF1Q9NWY4 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HPF1Q9NWY4 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HPF1Q9NWY4 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HPF1Q9NWY4 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HPF1Q9NWY4 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HPF1Q9NWY4 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HPF1Q9NWY4 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HPF1Q9NWY4 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HPF1Q9NWY4 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HPF1Q9NWY4 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms