Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRDM9Q9NQV7 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.09■□□□□ 0.33
PRDM9Q9NQV7 TSPY22P-201ENST00000427496 604 ntBASIC17.09■□□□□ 0.33
PRDM9Q9NQV7 UPK3BP1-201ENST00000428678 509 ntBASIC17.09■□□□□ 0.33
PRDM9Q9NQV7 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.09■□□□□ 0.33
PRDM9Q9NQV7 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.09■□□□□ 0.33
PRDM9Q9NQV7 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.09■□□□□ 0.33
PRDM9Q9NQV7 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRDM9Q9NQV7 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.09■□□□□ 0.33
PRDM9Q9NQV7 KRT8P26-201ENST00000534154 1276 ntBASIC17.09■□□□□ 0.33
PRDM9Q9NQV7 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.09■□□□□ 0.33
PRDM9Q9NQV7 AL390719.2-201ENST00000606993 987 ntBASIC17.09■□□□□ 0.33
PRDM9Q9NQV7 AL121672.3-201ENST00000608644 468 ntBASIC17.09■□□□□ 0.33
PRDM9Q9NQV7 AC069148.1-201ENST00000608741 768 ntBASIC17.09■□□□□ 0.33
PRDM9Q9NQV7 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PRDM9Q9NQV7 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRDM9Q9NQV7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRDM9Q9NQV7 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRDM9Q9NQV7 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PRDM9Q9NQV7 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRDM9Q9NQV7 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRDM9Q9NQV7 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRDM9Q9NQV7 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRDM9Q9NQV7 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRDM9Q9NQV7 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PRDM9Q9NQV7 NEFHP1-201ENST00000412845 2629 ntBASIC17.09■□□□□ 0.33
PRDM9Q9NQV7 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
PRDM9Q9NQV7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRDM9Q9NQV7 AC090340.1-201ENST00000620778 4980 ntBASIC17.08■□□□□ 0.33
PRDM9Q9NQV7 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
PRDM9Q9NQV7 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PRDM9Q9NQV7 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PRDM9Q9NQV7 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.08■□□□□ 0.33
PRDM9Q9NQV7 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PRDM9Q9NQV7 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
PRDM9Q9NQV7 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
PRDM9Q9NQV7 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.08■□□□□ 0.32
PRDM9Q9NQV7 AC022898.2-201ENST00000616822 1312 ntBASIC17.08■□□□□ 0.32
PRDM9Q9NQV7 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.08■□□□□ 0.32
PRDM9Q9NQV7 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRDM9Q9NQV7 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRDM9Q9NQV7 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PRDM9Q9NQV7 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.08■□□□□ 0.32
PRDM9Q9NQV7 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PRDM9Q9NQV7 BX276092.5-203ENST00000456199 560 ntBASIC17.08■□□□□ 0.32
PRDM9Q9NQV7 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PRDM9Q9NQV7 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.08■□□□□ 0.32
PRDM9Q9NQV7 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
PRDM9Q9NQV7 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
PRDM9Q9NQV7 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
PRDM9Q9NQV7 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.08■□□□□ 0.32
PRDM9Q9NQV7 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRDM9Q9NQV7 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
PRDM9Q9NQV7 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
PRDM9Q9NQV7 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRDM9Q9NQV7 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRDM9Q9NQV7 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRDM9Q9NQV7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PRDM9Q9NQV7 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRDM9Q9NQV7 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRDM9Q9NQV7 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.07■□□□□ 0.32
PRDM9Q9NQV7 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PRDM9Q9NQV7 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRDM9Q9NQV7 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRDM9Q9NQV7 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.07■□□□□ 0.32
PRDM9Q9NQV7 LINC00167-201ENST00000530583 1419 ntBASIC17.07■□□□□ 0.32
PRDM9Q9NQV7 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRDM9Q9NQV7 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.07■□□□□ 0.32
PRDM9Q9NQV7 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
PRDM9Q9NQV7 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRDM9Q9NQV7 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRDM9Q9NQV7 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.07■□□□□ 0.32
PRDM9Q9NQV7 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRDM9Q9NQV7 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRDM9Q9NQV7 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRDM9Q9NQV7 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.07■□□□□ 0.32
PRDM9Q9NQV7 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRDM9Q9NQV7 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.07■□□□□ 0.32
PRDM9Q9NQV7 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PRDM9Q9NQV7 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRDM9Q9NQV7 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRDM9Q9NQV7 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.07■□□□□ 0.32
PRDM9Q9NQV7 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.07■□□□□ 0.32
PRDM9Q9NQV7 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.07■□□□□ 0.32
PRDM9Q9NQV7 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRDM9Q9NQV7 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRDM9Q9NQV7 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRDM9Q9NQV7 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRDM9Q9NQV7 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.07■□□□□ 0.32
PRDM9Q9NQV7 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRDM9Q9NQV7 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRDM9Q9NQV7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PRDM9Q9NQV7 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRDM9Q9NQV7 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.06■□□□□ 0.32
PRDM9Q9NQV7 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRDM9Q9NQV7 KRT18P55-202ENST00000578578 1546 ntBASIC17.06■□□□□ 0.32
PRDM9Q9NQV7 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRDM9Q9NQV7 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
PRDM9Q9NQV7 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.06■□□□□ 0.32
PRDM9Q9NQV7 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms