Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHD8Q9HCK8 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CHD8Q9HCK8 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHD8Q9HCK8 AC074386.1-202ENST00000463561 864 ntBASIC16.7■□□□□ 0.26
CHD8Q9HCK8 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.7■□□□□ 0.26
CHD8Q9HCK8 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.7■□□□□ 0.26
CHD8Q9HCK8 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.7■□□□□ 0.26
CHD8Q9HCK8 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.7■□□□□ 0.26
CHD8Q9HCK8 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.7■□□□□ 0.26
CHD8Q9HCK8 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.7■□□□□ 0.26
CHD8Q9HCK8 TUBB3P1-201ENST00000405796 1332 ntBASIC16.7■□□□□ 0.26
CHD8Q9HCK8 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.7■□□□□ 0.26
CHD8Q9HCK8 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHD8Q9HCK8 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHD8Q9HCK8 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CHD8Q9HCK8 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.69■□□□□ 0.26
CHD8Q9HCK8 TEX21P-204ENST00000641479 1693 ntBASIC16.69■□□□□ 0.26
CHD8Q9HCK8 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHD8Q9HCK8 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHD8Q9HCK8 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CHD8Q9HCK8 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC16.69■□□□□ 0.26
CHD8Q9HCK8 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.69■□□□□ 0.26
CHD8Q9HCK8 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHD8Q9HCK8 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.69■□□□□ 0.26
CHD8Q9HCK8 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.69■□□□□ 0.26
CHD8Q9HCK8 AC017083.2-201ENST00000608069 979 ntBASIC16.69■□□□□ 0.26
CHD8Q9HCK8 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.69■□□□□ 0.26
CHD8Q9HCK8 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHD8Q9HCK8 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHD8Q9HCK8 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CHD8Q9HCK8 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.69■□□□□ 0.26
CHD8Q9HCK8 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.69■□□□□ 0.26
CHD8Q9HCK8 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHD8Q9HCK8 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.69■□□□□ 0.26
CHD8Q9HCK8 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHD8Q9HCK8 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
CHD8Q9HCK8 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
CHD8Q9HCK8 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHD8Q9HCK8 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHD8Q9HCK8 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.68■□□□□ 0.26
CHD8Q9HCK8 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.68■□□□□ 0.26
CHD8Q9HCK8 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.68■□□□□ 0.26
CHD8Q9HCK8 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHD8Q9HCK8 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.68■□□□□ 0.26
CHD8Q9HCK8 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHD8Q9HCK8 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHD8Q9HCK8 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.68■□□□□ 0.26
CHD8Q9HCK8 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHD8Q9HCK8 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.68■□□□□ 0.26
CHD8Q9HCK8 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHD8Q9HCK8 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.68■□□□□ 0.26
CHD8Q9HCK8 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHD8Q9HCK8 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.68■□□□□ 0.26
CHD8Q9HCK8 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHD8Q9HCK8 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHD8Q9HCK8 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHD8Q9HCK8 SPDYE21P-201ENST00000413323 827 ntBASIC16.68■□□□□ 0.26
CHD8Q9HCK8 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.68■□□□□ 0.26
CHD8Q9HCK8 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.68■□□□□ 0.26
CHD8Q9HCK8 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.68■□□□□ 0.26
CHD8Q9HCK8 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.68■□□□□ 0.26
CHD8Q9HCK8 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.68■□□□□ 0.26
CHD8Q9HCK8 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHD8Q9HCK8 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHD8Q9HCK8 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHD8Q9HCK8 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHD8Q9HCK8 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.67■□□□□ 0.26
CHD8Q9HCK8 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHD8Q9HCK8 MRPS18AP1-201ENST00000414458 589 ntBASIC16.67■□□□□ 0.26
CHD8Q9HCK8 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHD8Q9HCK8 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.67■□□□□ 0.26
CHD8Q9HCK8 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.67■□□□□ 0.26
CHD8Q9HCK8 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.67■□□□□ 0.26
CHD8Q9HCK8 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.67■□□□□ 0.26
CHD8Q9HCK8 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.67■□□□□ 0.26
CHD8Q9HCK8 AC068587.10-201ENST00000641210 219 ntBASIC16.67■□□□□ 0.26
CHD8Q9HCK8 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHD8Q9HCK8 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHD8Q9HCK8 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.67■□□□□ 0.26
CHD8Q9HCK8 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHD8Q9HCK8 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHD8Q9HCK8 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CHD8Q9HCK8 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.67■□□□□ 0.26
CHD8Q9HCK8 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
CHD8Q9HCK8 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHD8Q9HCK8 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.67■□□□□ 0.26
CHD8Q9HCK8 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
CHD8Q9HCK8 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.67■□□□□ 0.26
CHD8Q9HCK8 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHD8Q9HCK8 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.67■□□□□ 0.26
CHD8Q9HCK8 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.67■□□□□ 0.26
CHD8Q9HCK8 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.67■□□□□ 0.26
CHD8Q9HCK8 FAM8A2P-201ENST00000528813 1142 ntBASIC16.67■□□□□ 0.26
CHD8Q9HCK8 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.67■□□□□ 0.26
CHD8Q9HCK8 AC148477.5-201ENST00000625164 1645 ntBASIC16.67■□□□□ 0.26
CHD8Q9HCK8 MED17-221ENST00000639724 2317 ntTSL 5 BASIC16.67■□□□□ 0.26
CHD8Q9HCK8 AL805961.1-202ENST00000641562 540 ntBASIC16.67■□□□□ 0.26
CHD8Q9HCK8 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHD8Q9HCK8 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHD8Q9HCK8 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms