Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TUBB1Q9H4B7 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TUBB1Q9H4B7 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TUBB1Q9H4B7 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.44■□□□□ 0.38
TUBB1Q9H4B7 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.44■□□□□ 0.38
TUBB1Q9H4B7 AC009053.2-201ENST00000563701 2365 ntBASIC17.44■□□□□ 0.38
TUBB1Q9H4B7 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.44■□□□□ 0.38
TUBB1Q9H4B7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TUBB1Q9H4B7 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TUBB1Q9H4B7 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TUBB1Q9H4B7 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
TUBB1Q9H4B7 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TUBB1Q9H4B7 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TUBB1Q9H4B7 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TUBB1Q9H4B7 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.44■□□□□ 0.38
TUBB1Q9H4B7 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TUBB1Q9H4B7 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.44■□□□□ 0.38
TUBB1Q9H4B7 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.44■□□□□ 0.38
TUBB1Q9H4B7 PRORSD1P-202ENST00000563365 2154 ntBASIC17.44■□□□□ 0.38
TUBB1Q9H4B7 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TUBB1Q9H4B7 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.44■□□□□ 0.38
TUBB1Q9H4B7 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TUBB1Q9H4B7 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
TUBB1Q9H4B7 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TUBB1Q9H4B7 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.44■□□□□ 0.38
TUBB1Q9H4B7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
TUBB1Q9H4B7 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TUBB1Q9H4B7 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.43■□□□□ 0.38
TUBB1Q9H4B7 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TUBB1Q9H4B7 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TUBB1Q9H4B7 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.43■□□□□ 0.38
TUBB1Q9H4B7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TUBB1Q9H4B7 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TUBB1Q9H4B7 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.43■□□□□ 0.38
TUBB1Q9H4B7 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TUBB1Q9H4B7 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TUBB1Q9H4B7 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.43■□□□□ 0.38
TUBB1Q9H4B7 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TUBB1Q9H4B7 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
TUBB1Q9H4B7 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TUBB1Q9H4B7 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TUBB1Q9H4B7 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TUBB1Q9H4B7 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TUBB1Q9H4B7 AC009947.2-201ENST00000444014 672 ntBASIC17.43■□□□□ 0.38
TUBB1Q9H4B7 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.43■□□□□ 0.38
TUBB1Q9H4B7 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.43■□□□□ 0.38
TUBB1Q9H4B7 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.43■□□□□ 0.38
TUBB1Q9H4B7 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TUBB1Q9H4B7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.43■□□□□ 0.38
TUBB1Q9H4B7 AC010947.1-201ENST00000623454 693 ntBASIC17.43■□□□□ 0.38
TUBB1Q9H4B7 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TUBB1Q9H4B7 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TUBB1Q9H4B7 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.43■□□□□ 0.38
TUBB1Q9H4B7 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TUBB1Q9H4B7 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TUBB1Q9H4B7 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TUBB1Q9H4B7 AC106820.2-201ENST00000563775 3264 ntBASIC17.43■□□□□ 0.38
TUBB1Q9H4B7 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TUBB1Q9H4B7 LINC00167-201ENST00000530583 1419 ntBASIC17.43■□□□□ 0.38
TUBB1Q9H4B7 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TUBB1Q9H4B7 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TUBB1Q9H4B7 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TUBB1Q9H4B7 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TUBB1Q9H4B7 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TUBB1Q9H4B7 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TUBB1Q9H4B7 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TUBB1Q9H4B7 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.43■□□□□ 0.38
TUBB1Q9H4B7 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.43■□□□□ 0.38
TUBB1Q9H4B7 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TUBB1Q9H4B7 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TUBB1Q9H4B7 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TUBB1Q9H4B7 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TUBB1Q9H4B7 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TUBB1Q9H4B7 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.43■□□□□ 0.38
TUBB1Q9H4B7 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.43■□□□□ 0.38
TUBB1Q9H4B7 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TUBB1Q9H4B7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TUBB1Q9H4B7 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TUBB1Q9H4B7 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TUBB1Q9H4B7 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TUBB1Q9H4B7 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
TUBB1Q9H4B7 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TUBB1Q9H4B7 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.42■□□□□ 0.38
TUBB1Q9H4B7 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.42■□□□□ 0.38
TUBB1Q9H4B7 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TUBB1Q9H4B7 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
TUBB1Q9H4B7 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.42■□□□□ 0.38
TUBB1Q9H4B7 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TUBB1Q9H4B7 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.42■□□□□ 0.38
TUBB1Q9H4B7 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TUBB1Q9H4B7 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TUBB1Q9H4B7 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.42■□□□□ 0.38
TUBB1Q9H4B7 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
TUBB1Q9H4B7 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.42■□□□□ 0.38
TUBB1Q9H4B7 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TUBB1Q9H4B7 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.42■□□□□ 0.38
TUBB1Q9H4B7 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TUBB1Q9H4B7 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TUBB1Q9H4B7 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TUBB1Q9H4B7 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms