Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NDUFAF3Q9BU61 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.16
NDUFAF3Q9BU61 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NDUFAF3Q9BU61 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NDUFAF3Q9BU61 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
NDUFAF3Q9BU61 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NDUFAF3Q9BU61 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NDUFAF3Q9BU61 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.02□□□□□ -0.16
NDUFAF3Q9BU61 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
NDUFAF3Q9BU61 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NDUFAF3Q9BU61 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC14.02□□□□□ -0.16
NDUFAF3Q9BU61 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC14.02□□□□□ -0.16
NDUFAF3Q9BU61 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC14.02□□□□□ -0.16
NDUFAF3Q9BU61 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC14.02□□□□□ -0.16
NDUFAF3Q9BU61 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC14.02□□□□□ -0.17
NDUFAF3Q9BU61 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NDUFAF3Q9BU61 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NDUFAF3Q9BU61 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC14.02□□□□□ -0.17
NDUFAF3Q9BU61 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NDUFAF3Q9BU61 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
NDUFAF3Q9BU61 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC14.02□□□□□ -0.17
NDUFAF3Q9BU61 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC14.02□□□□□ -0.17
NDUFAF3Q9BU61 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
NDUFAF3Q9BU61 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
NDUFAF3Q9BU61 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NDUFAF3Q9BU61 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.02□□□□□ -0.17
NDUFAF3Q9BU61 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
NDUFAF3Q9BU61 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NDUFAF3Q9BU61 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NDUFAF3Q9BU61 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NDUFAF3Q9BU61 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NDUFAF3Q9BU61 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
NDUFAF3Q9BU61 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
NDUFAF3Q9BU61 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.02□□□□□ -0.17
NDUFAF3Q9BU61 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFAF3Q9BU61 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFAF3Q9BU61 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFAF3Q9BU61 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFAF3Q9BU61 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
NDUFAF3Q9BU61 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
NDUFAF3Q9BU61 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFAF3Q9BU61 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFAF3Q9BU61 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
NDUFAF3Q9BU61 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFAF3Q9BU61 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC14.01□□□□□ -0.17
NDUFAF3Q9BU61 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFAF3Q9BU61 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFAF3Q9BU61 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFAF3Q9BU61 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFAF3Q9BU61 AC012618.2-201ENST00000428058 849 ntBASIC14.01□□□□□ -0.17
NDUFAF3Q9BU61 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
NDUFAF3Q9BU61 ARL16-209ENST00000573715 763 ntTSL 3 BASIC14.01□□□□□ -0.17
NDUFAF3Q9BU61 ARL16-211ENST00000576135 694 ntTSL 3 BASIC14.01□□□□□ -0.17
NDUFAF3Q9BU61 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC14.01□□□□□ -0.17
NDUFAF3Q9BU61 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.01□□□□□ -0.17
NDUFAF3Q9BU61 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFAF3Q9BU61 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFAF3Q9BU61 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.01□□□□□ -0.17
NDUFAF3Q9BU61 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFAF3Q9BU61 FP475955.4-201ENST00000623131 1990 ntBASIC14.01□□□□□ -0.17
NDUFAF3Q9BU61 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
NDUFAF3Q9BU61 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFAF3Q9BU61 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC14.01□□□□□ -0.17
NDUFAF3Q9BU61 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFAF3Q9BU61 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.01□□□□□ -0.17
NDUFAF3Q9BU61 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
NDUFAF3Q9BU61 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFAF3Q9BU61 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.01□□□□□ -0.17
NDUFAF3Q9BU61 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFAF3Q9BU61 AL121761.2-201ENST00000598007 1648 ntBASIC14.01□□□□□ -0.17
NDUFAF3Q9BU61 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFAF3Q9BU61 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC14□□□□□ -0.17
NDUFAF3Q9BU61 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC14□□□□□ -0.17
NDUFAF3Q9BU61 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC14□□□□□ -0.17
NDUFAF3Q9BU61 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC14□□□□□ -0.17
NDUFAF3Q9BU61 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC14□□□□□ -0.17
NDUFAF3Q9BU61 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
NDUFAF3Q9BU61 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NDUFAF3Q9BU61 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NDUFAF3Q9BU61 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC14□□□□□ -0.17
NDUFAF3Q9BU61 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NDUFAF3Q9BU61 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NDUFAF3Q9BU61 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC14□□□□□ -0.17
NDUFAF3Q9BU61 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
NDUFAF3Q9BU61 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
NDUFAF3Q9BU61 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC14□□□□□ -0.17
NDUFAF3Q9BU61 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NDUFAF3Q9BU61 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
NDUFAF3Q9BU61 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NDUFAF3Q9BU61 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
NDUFAF3Q9BU61 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC14□□□□□ -0.17
NDUFAF3Q9BU61 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC14□□□□□ -0.17
NDUFAF3Q9BU61 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NDUFAF3Q9BU61 YBX1P10-201ENST00000444752 975 ntBASIC14□□□□□ -0.17
NDUFAF3Q9BU61 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC14□□□□□ -0.17
NDUFAF3Q9BU61 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC14□□□□□ -0.17
NDUFAF3Q9BU61 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC14□□□□□ -0.17
NDUFAF3Q9BU61 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC14□□□□□ -0.17
NDUFAF3Q9BU61 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
NDUFAF3Q9BU61 AL121829.2-201ENST00000620908 328 ntBASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms