Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHRDL1Q9BU40 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CHRDL1Q9BU40 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CHRDL1Q9BU40 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC14.4□□□□□ -0.1
CHRDL1Q9BU40 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHRDL1Q9BU40 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC14.4□□□□□ -0.1
CHRDL1Q9BU40 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHRDL1Q9BU40 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC14.4□□□□□ -0.1
CHRDL1Q9BU40 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC14.4□□□□□ -0.1
CHRDL1Q9BU40 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC14.4□□□□□ -0.1
CHRDL1Q9BU40 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC14.4□□□□□ -0.1
CHRDL1Q9BU40 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CHRDL1Q9BU40 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CHRDL1Q9BU40 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHRDL1Q9BU40 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC14.4□□□□□ -0.1
CHRDL1Q9BU40 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC14.4□□□□□ -0.1
CHRDL1Q9BU40 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC14.4□□□□□ -0.1
CHRDL1Q9BU40 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC14.4□□□□□ -0.1
CHRDL1Q9BU40 SLC25A1P2-201ENST00000430693 912 ntBASIC14.4□□□□□ -0.1
CHRDL1Q9BU40 AP003041.3-201ENST00000527151 707 ntBASIC14.4□□□□□ -0.1
CHRDL1Q9BU40 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CHRDL1Q9BU40 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC14.4□□□□□ -0.1
CHRDL1Q9BU40 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHRDL1Q9BU40 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC14.4□□□□□ -0.1
CHRDL1Q9BU40 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHRDL1Q9BU40 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CHRDL1Q9BU40 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC14.4□□□□□ -0.1
CHRDL1Q9BU40 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
CHRDL1Q9BU40 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHRDL1Q9BU40 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHRDL1Q9BU40 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CHRDL1Q9BU40 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CHRDL1Q9BU40 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC14.4□□□□□ -0.1
CHRDL1Q9BU40 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CHRDL1Q9BU40 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CHRDL1Q9BU40 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRDL1Q9BU40 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRDL1Q9BU40 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CHRDL1Q9BU40 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRDL1Q9BU40 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRDL1Q9BU40 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRDL1Q9BU40 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRDL1Q9BU40 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRDL1Q9BU40 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRDL1Q9BU40 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CHRDL1Q9BU40 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CHRDL1Q9BU40 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRDL1Q9BU40 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRDL1Q9BU40 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CHRDL1Q9BU40 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRDL1Q9BU40 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRDL1Q9BU40 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRDL1Q9BU40 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRDL1Q9BU40 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRDL1Q9BU40 SLC25A6P5-201ENST00000435663 894 ntBASIC14.39□□□□□ -0.11
CHRDL1Q9BU40 ELP6-205ENST00000439305 880 ntTSL 2 BASIC14.39□□□□□ -0.11
CHRDL1Q9BU40 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC14.39□□□□□ -0.11
CHRDL1Q9BU40 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC14.39□□□□□ -0.11
CHRDL1Q9BU40 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC14.39□□□□□ -0.11
CHRDL1Q9BU40 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CHRDL1Q9BU40 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CHRDL1Q9BU40 AC067852.2-201ENST00000590513 2313 ntBASIC14.39□□□□□ -0.11
CHRDL1Q9BU40 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRDL1Q9BU40 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRDL1Q9BU40 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRDL1Q9BU40 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRDL1Q9BU40 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
CHRDL1Q9BU40 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRDL1Q9BU40 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC14.39□□□□□ -0.11
CHRDL1Q9BU40 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRDL1Q9BU40 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC14.39□□□□□ -0.11
CHRDL1Q9BU40 ESPNP-201ENST00000270691 2015 ntBASIC14.39□□□□□ -0.11
CHRDL1Q9BU40 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRDL1Q9BU40 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CHRDL1Q9BU40 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC14.39□□□□□ -0.11
CHRDL1Q9BU40 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRDL1Q9BU40 AC036111.1-201ENST00000533973 1582 ntBASIC14.39□□□□□ -0.11
CHRDL1Q9BU40 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHRDL1Q9BU40 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHRDL1Q9BU40 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC14.38□□□□□ -0.11
CHRDL1Q9BU40 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC14.38□□□□□ -0.11
CHRDL1Q9BU40 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHRDL1Q9BU40 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHRDL1Q9BU40 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHRDL1Q9BU40 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CHRDL1Q9BU40 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CHRDL1Q9BU40 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHRDL1Q9BU40 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHRDL1Q9BU40 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CHRDL1Q9BU40 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHRDL1Q9BU40 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHRDL1Q9BU40 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHRDL1Q9BU40 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHRDL1Q9BU40 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHRDL1Q9BU40 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC14.38□□□□□ -0.11
CHRDL1Q9BU40 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CHRDL1Q9BU40 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CHRDL1Q9BU40 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC14.38□□□□□ -0.11
CHRDL1Q9BU40 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC14.38□□□□□ -0.11
CHRDL1Q9BU40 TSPY17P-201ENST00000450329 467 ntBASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms