Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.32■□□□□ 0.04
SEC22CQ9BRL7 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SEC22CQ9BRL7 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SEC22CQ9BRL7 AL138688.1-201ENST00000624851 1594 ntBASIC15.32■□□□□ 0.04
SEC22CQ9BRL7 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SEC22CQ9BRL7 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC15.32■□□□□ 0.04
SEC22CQ9BRL7 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.32■□□□□ 0.04
SEC22CQ9BRL7 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SEC22CQ9BRL7 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SEC22CQ9BRL7 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SEC22CQ9BRL7 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEC22CQ9BRL7 PCDHA1-201ENST00000378133 2726 ntBASIC15.31■□□□□ 0.04
SEC22CQ9BRL7 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEC22CQ9BRL7 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SEC22CQ9BRL7 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEC22CQ9BRL7 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SEC22CQ9BRL7 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEC22CQ9BRL7 MFF-205ENST00000354503 1085 ntTSL 2 BASIC15.31■□□□□ 0.04
SEC22CQ9BRL7 STX7-201ENST00000367937 1090 ntTSL 5 BASIC15.31■□□□□ 0.04
SEC22CQ9BRL7 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEC22CQ9BRL7 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC15.31■□□□□ 0.04
SEC22CQ9BRL7 KRT18P11-201ENST00000435214 1283 ntBASIC15.31■□□□□ 0.04
SEC22CQ9BRL7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC15.31■□□□□ 0.04
SEC22CQ9BRL7 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC15.31■□□□□ 0.04
SEC22CQ9BRL7 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC15.31■□□□□ 0.04
SEC22CQ9BRL7 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SEC22CQ9BRL7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SEC22CQ9BRL7 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC15.31■□□□□ 0.04
SEC22CQ9BRL7 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SEC22CQ9BRL7 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SEC22CQ9BRL7 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SEC22CQ9BRL7 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SEC22CQ9BRL7 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SEC22CQ9BRL7 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SEC22CQ9BRL7 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SEC22CQ9BRL7 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEC22CQ9BRL7 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEC22CQ9BRL7 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEC22CQ9BRL7 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEC22CQ9BRL7 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEC22CQ9BRL7 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SEC22CQ9BRL7 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.31■□□□□ 0.04
SEC22CQ9BRL7 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEC22CQ9BRL7 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.3■□□□□ 0.04
SEC22CQ9BRL7 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEC22CQ9BRL7 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEC22CQ9BRL7 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEC22CQ9BRL7 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SEC22CQ9BRL7 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEC22CQ9BRL7 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SEC22CQ9BRL7 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEC22CQ9BRL7 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEC22CQ9BRL7 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEC22CQ9BRL7 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEC22CQ9BRL7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEC22CQ9BRL7 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.3■□□□□ 0.04
SEC22CQ9BRL7 APTR-203ENST00000430801 583 ntTSL 5 BASIC15.3■□□□□ 0.04
SEC22CQ9BRL7 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SEC22CQ9BRL7 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEC22CQ9BRL7 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC15.3■□□□□ 0.04
SEC22CQ9BRL7 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.3■□□□□ 0.04
SEC22CQ9BRL7 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SEC22CQ9BRL7 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.3■□□□□ 0.04
SEC22CQ9BRL7 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC15.3■□□□□ 0.04
SEC22CQ9BRL7 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC15.3■□□□□ 0.04
SEC22CQ9BRL7 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC15.3■□□□□ 0.04
SEC22CQ9BRL7 CRK-204ENST00000574295 1391 ntTSL 5 BASIC15.3■□□□□ 0.04
SEC22CQ9BRL7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC15.3■□□□□ 0.04
SEC22CQ9BRL7 RAP2CP1-201ENST00000605103 478 ntBASIC15.3■□□□□ 0.04
SEC22CQ9BRL7 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SEC22CQ9BRL7 OR10C1-204ENST00000622521 1039 ntBASIC15.3■□□□□ 0.04
SEC22CQ9BRL7 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEC22CQ9BRL7 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEC22CQ9BRL7 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SEC22CQ9BRL7 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SEC22CQ9BRL7 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SEC22CQ9BRL7 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.29■□□□□ 0.04
SEC22CQ9BRL7 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SEC22CQ9BRL7 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.29■□□□□ 0.04
SEC22CQ9BRL7 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SEC22CQ9BRL7 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SEC22CQ9BRL7 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.29■□□□□ 0.04
SEC22CQ9BRL7 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SEC22CQ9BRL7 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SEC22CQ9BRL7 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.29■□□□□ 0.04
SEC22CQ9BRL7 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SEC22CQ9BRL7 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC15.29■□□□□ 0.04
SEC22CQ9BRL7 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC15.29■□□□□ 0.04
SEC22CQ9BRL7 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SEC22CQ9BRL7 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SEC22CQ9BRL7 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SEC22CQ9BRL7 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SEC22CQ9BRL7 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.29■□□□□ 0.04
SEC22CQ9BRL7 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SEC22CQ9BRL7 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SEC22CQ9BRL7 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SEC22CQ9BRL7 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SEC22CQ9BRL7 ISCU-212ENST00000547005 795 ntTSL 3 BASIC15.29■□□□□ 0.04
SEC22CQ9BRL7 MAX-217ENST00000557277 728 ntTSL 3 BASIC15.29■□□□□ 0.04
SEC22CQ9BRL7 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms