Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC21.04■□□□□ 0.96
SDF4Q9BRK5 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SDF4Q9BRK5 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SDF4Q9BRK5 ISCU-203ENST00000431221 799 ntTSL 2 BASIC21.04■□□□□ 0.96
SDF4Q9BRK5 RASA4DP-201ENST00000460726 1199 ntBASIC21.04■□□□□ 0.96
SDF4Q9BRK5 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC21.04■□□□□ 0.96
SDF4Q9BRK5 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.04■□□□□ 0.96
SDF4Q9BRK5 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SDF4Q9BRK5 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SDF4Q9BRK5 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.04■□□□□ 0.96
SDF4Q9BRK5 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC21.04■□□□□ 0.96
SDF4Q9BRK5 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC21.04■□□□□ 0.96
SDF4Q9BRK5 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SDF4Q9BRK5 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SDF4Q9BRK5 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SDF4Q9BRK5 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SDF4Q9BRK5 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SDF4Q9BRK5 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SDF4Q9BRK5 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21.04■□□□□ 0.96
SDF4Q9BRK5 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
SDF4Q9BRK5 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SDF4Q9BRK5 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SDF4Q9BRK5 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SDF4Q9BRK5 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SDF4Q9BRK5 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SDF4Q9BRK5 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SDF4Q9BRK5 KRT8P7-201ENST00000533003 1432 ntBASIC21.04■□□□□ 0.96
SDF4Q9BRK5 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.04■□□□□ 0.96
SDF4Q9BRK5 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SDF4Q9BRK5 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SDF4Q9BRK5 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21.03■□□□□ 0.96
SDF4Q9BRK5 HR-201ENST00000312841 5351 ntTSL 5 BASIC21.03■□□□□ 0.96
SDF4Q9BRK5 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SDF4Q9BRK5 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC21.03■□□□□ 0.96
SDF4Q9BRK5 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SDF4Q9BRK5 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SDF4Q9BRK5 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SDF4Q9BRK5 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SDF4Q9BRK5 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SDF4Q9BRK5 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
SDF4Q9BRK5 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SDF4Q9BRK5 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC21.03■□□□□ 0.96
SDF4Q9BRK5 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
SDF4Q9BRK5 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SDF4Q9BRK5 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SDF4Q9BRK5 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SDF4Q9BRK5 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SDF4Q9BRK5 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC21.03■□□□□ 0.96
SDF4Q9BRK5 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SDF4Q9BRK5 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SDF4Q9BRK5 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SDF4Q9BRK5 DAP-202ENST00000432074 1048 ntTSL 2 BASIC21.03■□□□□ 0.96
SDF4Q9BRK5 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC21.03■□□□□ 0.96
SDF4Q9BRK5 SEC1P-202ENST00000473944 940 ntBASIC21.03■□□□□ 0.96
SDF4Q9BRK5 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC21.03■□□□□ 0.96
SDF4Q9BRK5 DBP-204ENST00000599385 709 ntTSL 3 BASIC21.03■□□□□ 0.96
SDF4Q9BRK5 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SDF4Q9BRK5 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
SDF4Q9BRK5 AC091076.1-201ENST00000610741 619 ntBASIC21.03■□□□□ 0.96
SDF4Q9BRK5 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
SDF4Q9BRK5 AL358472.4-201ENST00000633140 710 ntBASIC21.03■□□□□ 0.96
SDF4Q9BRK5 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
SDF4Q9BRK5 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SDF4Q9BRK5 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC21.03■□□□□ 0.96
SDF4Q9BRK5 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
SDF4Q9BRK5 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SDF4Q9BRK5 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SDF4Q9BRK5 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
SDF4Q9BRK5 PKD1P1-201ENST00000458669 6805 ntBASIC21.03■□□□□ 0.96
SDF4Q9BRK5 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SDF4Q9BRK5 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SDF4Q9BRK5 AC008764.6-201ENST00000595909 2069 ntBASIC21.03■□□□□ 0.96
SDF4Q9BRK5 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SDF4Q9BRK5 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SDF4Q9BRK5 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SDF4Q9BRK5 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC21.03■□□□□ 0.96
SDF4Q9BRK5 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SDF4Q9BRK5 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC21.03■□□□□ 0.96
SDF4Q9BRK5 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SDF4Q9BRK5 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
SDF4Q9BRK5 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.02■□□□□ 0.96
SDF4Q9BRK5 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SDF4Q9BRK5 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC21.02■□□□□ 0.96
SDF4Q9BRK5 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21.02■□□□□ 0.96
SDF4Q9BRK5 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.02■□□□□ 0.96
SDF4Q9BRK5 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.02■□□□□ 0.96
SDF4Q9BRK5 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC21.02■□□□□ 0.96
SDF4Q9BRK5 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.02■□□□□ 0.96
SDF4Q9BRK5 AC034236.2-201ENST00000606662 1610 ntBASIC21.02■□□□□ 0.96
SDF4Q9BRK5 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SDF4Q9BRK5 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC21.02■□□□□ 0.96
SDF4Q9BRK5 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
SDF4Q9BRK5 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SDF4Q9BRK5 LINC01311-201ENST00000565162 1445 ntBASIC21.02■□□□□ 0.96
SDF4Q9BRK5 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SDF4Q9BRK5 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
SDF4Q9BRK5 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.95
SDF4Q9BRK5 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SDF4Q9BRK5 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SDF4Q9BRK5 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms