Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
MUC4Q99102 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
MUC4Q99102 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MUC4Q99102 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
MUC4Q99102 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC13.22□□□□□ -0.29
MUC4Q99102 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
MUC4Q99102 BANP-227ENST00000626016 2144 ntTSL 2 BASIC13.22□□□□□ -0.29
MUC4Q99102 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
MUC4Q99102 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
MUC4Q99102 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
MUC4Q99102 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MUC4Q99102 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
MUC4Q99102 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
MUC4Q99102 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MUC4Q99102 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
MUC4Q99102 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
MUC4Q99102 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
MUC4Q99102 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
MUC4Q99102 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC13.22□□□□□ -0.29
MUC4Q99102 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
MUC4Q99102 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC13.22□□□□□ -0.29
MUC4Q99102 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MUC4Q99102 BUB3-202ENST00000368859 667 ntTSL 3 BASIC13.22□□□□□ -0.29
MUC4Q99102 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC13.22□□□□□ -0.29
MUC4Q99102 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
MUC4Q99102 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC13.22□□□□□ -0.29
MUC4Q99102 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MUC4Q99102 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
MUC4Q99102 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MUC4Q99102 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
MUC4Q99102 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC13.22□□□□□ -0.29
MUC4Q99102 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
MUC4Q99102 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MUC4Q99102 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
MUC4Q99102 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC13.22□□□□□ -0.29
MUC4Q99102 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MUC4Q99102 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
MUC4Q99102 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC13.22□□□□□ -0.29
MUC4Q99102 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC13.22□□□□□ -0.29
MUC4Q99102 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
MUC4Q99102 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
MUC4Q99102 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
MUC4Q99102 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC13.21□□□□□ -0.29
MUC4Q99102 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
MUC4Q99102 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MUC4Q99102 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MUC4Q99102 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
MUC4Q99102 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MUC4Q99102 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
MUC4Q99102 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MUC4Q99102 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC13.21□□□□□ -0.29
MUC4Q99102 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC13.21□□□□□ -0.29
MUC4Q99102 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC13.21□□□□□ -0.29
MUC4Q99102 VPS72-207ENST00000640458 689 ntTSL 5 BASIC13.21□□□□□ -0.29
MUC4Q99102 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
MUC4Q99102 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
MUC4Q99102 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
MUC4Q99102 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MUC4Q99102 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC13.21□□□□□ -0.29
MUC4Q99102 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
MUC4Q99102 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MUC4Q99102 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC13.21□□□□□ -0.29
MUC4Q99102 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MUC4Q99102 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
MUC4Q99102 LINC01126-201ENST00000623515 1646 ntBASIC13.21□□□□□ -0.29
MUC4Q99102 AC106820.2-201ENST00000563775 3264 ntBASIC13.21□□□□□ -0.29
MUC4Q99102 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC13.21□□□□□ -0.29
MUC4Q99102 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
MUC4Q99102 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
MUC4Q99102 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
MUC4Q99102 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC13.21□□□□□ -0.3
MUC4Q99102 CCR12P-201ENST00000446203 998 ntBASIC13.21□□□□□ -0.3
MUC4Q99102 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
MUC4Q99102 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
MUC4Q99102 AC010653.2-201ENST00000623505 997 ntBASIC13.21□□□□□ -0.3
MUC4Q99102 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
MUC4Q99102 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.3
MUC4Q99102 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC13.21□□□□□ -0.3
MUC4Q99102 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
MUC4Q99102 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC13.21□□□□□ -0.3
MUC4Q99102 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC13.21□□□□□ -0.3
MUC4Q99102 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
MUC4Q99102 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC13.21□□□□□ -0.3
MUC4Q99102 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
MUC4Q99102 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
MUC4Q99102 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
MUC4Q99102 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
MUC4Q99102 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
MUC4Q99102 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC13.2□□□□□ -0.3
MUC4Q99102 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MUC4Q99102 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MUC4Q99102 AC073508.3-201ENST00000619697 1419 ntBASIC13.2□□□□□ -0.3
MUC4Q99102 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
MUC4Q99102 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
MUC4Q99102 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MUC4Q99102 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
MUC4Q99102 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
MUC4Q99102 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MUC4Q99102 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC13.2□□□□□ -0.3
MUC4Q99102 NMU-205ENST00000511469 756 ntTSL 3 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms