Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDK5RAP2Q96SN8 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDK5RAP2Q96SN8 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CDK5RAP2Q96SN8 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDK5RAP2Q96SN8 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
CDK5RAP2Q96SN8 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDK5RAP2Q96SN8 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC21.19■□□□□ 0.98
CDK5RAP2Q96SN8 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDK5RAP2Q96SN8 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDK5RAP2Q96SN8 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDK5RAP2Q96SN8 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDK5RAP2Q96SN8 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC21.19■□□□□ 0.98
CDK5RAP2Q96SN8 AC122714.2-201ENST00000502787 707 ntBASIC21.19■□□□□ 0.98
CDK5RAP2Q96SN8 OR7E14P-202ENST00000530490 1290 ntBASIC21.19■□□□□ 0.98
CDK5RAP2Q96SN8 LINC01711-201ENST00000598340 967 ntBASIC21.19■□□□□ 0.98
CDK5RAP2Q96SN8 AD001527.2-201ENST00000622994 785 ntBASIC21.19■□□□□ 0.98
CDK5RAP2Q96SN8 AC008735.5-201ENST00000623544 497 ntBASIC21.19■□□□□ 0.98
CDK5RAP2Q96SN8 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDK5RAP2Q96SN8 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDK5RAP2Q96SN8 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDK5RAP2Q96SN8 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDK5RAP2Q96SN8 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDK5RAP2Q96SN8 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDK5RAP2Q96SN8 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDK5RAP2Q96SN8 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDK5RAP2Q96SN8 RPS2P1-201ENST00000434010 821 ntBASIC21.18■□□□□ 0.98
CDK5RAP2Q96SN8 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDK5RAP2Q96SN8 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDK5RAP2Q96SN8 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDK5RAP2Q96SN8 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDK5RAP2Q96SN8 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDK5RAP2Q96SN8 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDK5RAP2Q96SN8 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDK5RAP2Q96SN8 PMPCAP1-201ENST00000508114 1576 ntBASIC21.18■□□□□ 0.98
CDK5RAP2Q96SN8 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC21.18■□□□□ 0.98
CDK5RAP2Q96SN8 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CDK5RAP2Q96SN8 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDK5RAP2Q96SN8 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
CDK5RAP2Q96SN8 RAB17-203ENST00000409576 466 ntTSL 3 BASIC21.18■□□□□ 0.98
CDK5RAP2Q96SN8 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDK5RAP2Q96SN8 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC21.18■□□□□ 0.98
CDK5RAP2Q96SN8 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC21.18■□□□□ 0.98
CDK5RAP2Q96SN8 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDK5RAP2Q96SN8 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC21.17■□□□□ 0.98
CDK5RAP2Q96SN8 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDK5RAP2Q96SN8 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
CDK5RAP2Q96SN8 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CDK5RAP2Q96SN8 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDK5RAP2Q96SN8 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDK5RAP2Q96SN8 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC21.17■□□□□ 0.98
CDK5RAP2Q96SN8 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC21.17■□□□□ 0.98
CDK5RAP2Q96SN8 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDK5RAP2Q96SN8 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDK5RAP2Q96SN8 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDK5RAP2Q96SN8 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC21.17■□□□□ 0.98
CDK5RAP2Q96SN8 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC21.17■□□□□ 0.98
CDK5RAP2Q96SN8 AC079776.4-201ENST00000511039 504 ntBASIC21.17■□□□□ 0.98
CDK5RAP2Q96SN8 MOK-208ENST00000519058 917 ntTSL 2 BASIC21.17■□□□□ 0.98
CDK5RAP2Q96SN8 RNF151-202ENST00000569210 853 ntTSL 2 BASIC21.17■□□□□ 0.98
CDK5RAP2Q96SN8 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC21.17■□□□□ 0.98
CDK5RAP2Q96SN8 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDK5RAP2Q96SN8 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC21.17■□□□□ 0.98
CDK5RAP2Q96SN8 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.17■□□□□ 0.98
CDK5RAP2Q96SN8 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDK5RAP2Q96SN8 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDK5RAP2Q96SN8 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC21.17■□□□□ 0.98
CDK5RAP2Q96SN8 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDK5RAP2Q96SN8 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CDK5RAP2Q96SN8 AL138781.2-201ENST00000617896 1843 ntBASIC21.16■□□□□ 0.98
CDK5RAP2Q96SN8 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDK5RAP2Q96SN8 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDK5RAP2Q96SN8 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC21.16■□□□□ 0.98
CDK5RAP2Q96SN8 MIR574-201ENST00000385209 96 ntBASIC21.16■□□□□ 0.98
CDK5RAP2Q96SN8 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDK5RAP2Q96SN8 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDK5RAP2Q96SN8 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDK5RAP2Q96SN8 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.16■□□□□ 0.98
CDK5RAP2Q96SN8 AL353593.2-201ENST00000602529 1483 ntBASIC21.16■□□□□ 0.98
CDK5RAP2Q96SN8 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDK5RAP2Q96SN8 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC21.16■□□□□ 0.98
CDK5RAP2Q96SN8 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDK5RAP2Q96SN8 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDK5RAP2Q96SN8 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDK5RAP2Q96SN8 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDK5RAP2Q96SN8 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDK5RAP2Q96SN8 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CDK5RAP2Q96SN8 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC21.15■□□□□ 0.98
CDK5RAP2Q96SN8 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDK5RAP2Q96SN8 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDK5RAP2Q96SN8 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDK5RAP2Q96SN8 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDK5RAP2Q96SN8 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDK5RAP2Q96SN8 AC132008.2-207ENST00000454517 770 ntBASIC21.15■□□□□ 0.98
CDK5RAP2Q96SN8 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDK5RAP2Q96SN8 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
CDK5RAP2Q96SN8 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CDK5RAP2Q96SN8 PNMT-203ENST00000581428 677 ntTSL 2 BASIC21.15■□□□□ 0.98
CDK5RAP2Q96SN8 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC21.15■□□□□ 0.98
CDK5RAP2Q96SN8 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDK5RAP2Q96SN8 AC025062.2-201ENST00000605477 670 ntBASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms