Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF558Q96NG5 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.15■□□□□ 0.66
ZNF558Q96NG5 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.15■□□□□ 0.66
ZNF558Q96NG5 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.15■□□□□ 0.66
ZNF558Q96NG5 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF558Q96NG5 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.15■□□□□ 0.66
ZNF558Q96NG5 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.15■□□□□ 0.66
ZNF558Q96NG5 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.15■□□□□ 0.66
ZNF558Q96NG5 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
ZNF558Q96NG5 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ZNF558Q96NG5 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.15■□□□□ 0.66
ZNF558Q96NG5 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF558Q96NG5 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF558Q96NG5 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF558Q96NG5 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF558Q96NG5 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.15■□□□□ 0.66
ZNF558Q96NG5 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.15■□□□□ 0.66
ZNF558Q96NG5 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.15■□□□□ 0.66
ZNF558Q96NG5 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.15■□□□□ 0.66
ZNF558Q96NG5 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF558Q96NG5 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF558Q96NG5 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF558Q96NG5 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
ZNF558Q96NG5 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
ZNF558Q96NG5 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.14■□□□□ 0.66
ZNF558Q96NG5 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
ZNF558Q96NG5 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ZNF558Q96NG5 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.14■□□□□ 0.65
ZNF558Q96NG5 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
ZNF558Q96NG5 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF558Q96NG5 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF558Q96NG5 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF558Q96NG5 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF558Q96NG5 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF558Q96NG5 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF558Q96NG5 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF558Q96NG5 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF558Q96NG5 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF558Q96NG5 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
ZNF558Q96NG5 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.14■□□□□ 0.65
ZNF558Q96NG5 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF558Q96NG5 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.14■□□□□ 0.65
ZNF558Q96NG5 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF558Q96NG5 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF558Q96NG5 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF558Q96NG5 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
ZNF558Q96NG5 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.14■□□□□ 0.65
ZNF558Q96NG5 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF558Q96NG5 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.65
ZNF558Q96NG5 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.14■□□□□ 0.65
ZNF558Q96NG5 AC132938.6-201ENST00000623828 1655 ntBASIC19.14■□□□□ 0.65
ZNF558Q96NG5 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF558Q96NG5 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF558Q96NG5 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
ZNF558Q96NG5 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF558Q96NG5 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF558Q96NG5 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
ZNF558Q96NG5 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF558Q96NG5 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF558Q96NG5 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF558Q96NG5 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.13■□□□□ 0.65
ZNF558Q96NG5 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
ZNF558Q96NG5 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.13■□□□□ 0.65
ZNF558Q96NG5 LAGE3P1-201ENST00000425356 484 ntBASIC19.13■□□□□ 0.65
ZNF558Q96NG5 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.13■□□□□ 0.65
ZNF558Q96NG5 KRT18P3-201ENST00000451602 1288 ntBASIC19.13■□□□□ 0.65
ZNF558Q96NG5 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
ZNF558Q96NG5 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.13■□□□□ 0.65
ZNF558Q96NG5 AC092183.1-201ENST00000469884 875 ntBASIC19.13■□□□□ 0.65
ZNF558Q96NG5 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.13■□□□□ 0.65
ZNF558Q96NG5 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF558Q96NG5 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.13■□□□□ 0.65
ZNF558Q96NG5 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
ZNF558Q96NG5 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.13■□□□□ 0.65
ZNF558Q96NG5 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF558Q96NG5 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
ZNF558Q96NG5 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.13■□□□□ 0.65
ZNF558Q96NG5 AP002414.3-201ENST00000589352 1468 ntBASIC19.13■□□□□ 0.65
ZNF558Q96NG5 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF558Q96NG5 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.13■□□□□ 0.65
ZNF558Q96NG5 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.13■□□□□ 0.65
ZNF558Q96NG5 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF558Q96NG5 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.13■□□□□ 0.65
ZNF558Q96NG5 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF558Q96NG5 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF558Q96NG5 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF558Q96NG5 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF558Q96NG5 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF558Q96NG5 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.12■□□□□ 0.65
ZNF558Q96NG5 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF558Q96NG5 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF558Q96NG5 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.12■□□□□ 0.65
ZNF558Q96NG5 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.12■□□□□ 0.65
ZNF558Q96NG5 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.12■□□□□ 0.65
ZNF558Q96NG5 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF558Q96NG5 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.12■□□□□ 0.65
ZNF558Q96NG5 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF558Q96NG5 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF558Q96NG5 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF558Q96NG5 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms