Protein–RNA interactions for Protein: Q8WXC6

COPS9, COP9 signalosome complex subunit 9, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9Q8WXC6 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC12.25□□□□□ -0.45
COPS9Q8WXC6 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
COPS9Q8WXC6 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
COPS9Q8WXC6 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
COPS9Q8WXC6 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
COPS9Q8WXC6 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
COPS9Q8WXC6 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC12.25□□□□□ -0.45
COPS9Q8WXC6 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
COPS9Q8WXC6 LINC00602-201ENST00000629776 2065 ntBASIC12.25□□□□□ -0.45
COPS9Q8WXC6 AC080080.1-201ENST00000625121 2420 ntBASIC12.25□□□□□ -0.45
COPS9Q8WXC6 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
COPS9Q8WXC6 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
COPS9Q8WXC6 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
COPS9Q8WXC6 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
COPS9Q8WXC6 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
COPS9Q8WXC6 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
COPS9Q8WXC6 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
COPS9Q8WXC6 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
COPS9Q8WXC6 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
COPS9Q8WXC6 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
COPS9Q8WXC6 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
COPS9Q8WXC6 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
COPS9Q8WXC6 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
COPS9Q8WXC6 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
COPS9Q8WXC6 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
COPS9Q8WXC6 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
COPS9Q8WXC6 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC12.24□□□□□ -0.45
COPS9Q8WXC6 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC12.24□□□□□ -0.45
COPS9Q8WXC6 AC123595.1-201ENST00000440769 1046 ntBASIC12.24□□□□□ -0.45
COPS9Q8WXC6 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC12.24□□□□□ -0.45
COPS9Q8WXC6 GMCL1P1-201ENST00000463439 1581 ntBASIC12.24□□□□□ -0.45
COPS9Q8WXC6 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
COPS9Q8WXC6 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC12.24□□□□□ -0.45
COPS9Q8WXC6 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC12.24□□□□□ -0.45
COPS9Q8WXC6 AL096828.2-201ENST00000567259 1965 ntBASIC12.24□□□□□ -0.45
COPS9Q8WXC6 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC12.24□□□□□ -0.45
COPS9Q8WXC6 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC12.24□□□□□ -0.45
COPS9Q8WXC6 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
COPS9Q8WXC6 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
COPS9Q8WXC6 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
COPS9Q8WXC6 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
COPS9Q8WXC6 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
COPS9Q8WXC6 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
COPS9Q8WXC6 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC12.23□□□□□ -0.45
COPS9Q8WXC6 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
COPS9Q8WXC6 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
COPS9Q8WXC6 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
COPS9Q8WXC6 AL499627.1-201ENST00000569373 2188 ntBASIC12.23□□□□□ -0.45
COPS9Q8WXC6 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC12.23□□□□□ -0.45
COPS9Q8WXC6 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
COPS9Q8WXC6 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC12.23□□□□□ -0.45
COPS9Q8WXC6 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
COPS9Q8WXC6 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
COPS9Q8WXC6 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
COPS9Q8WXC6 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
COPS9Q8WXC6 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
COPS9Q8WXC6 MYLKP1-201ENST00000509077 1580 ntBASIC12.23□□□□□ -0.45
COPS9Q8WXC6 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
COPS9Q8WXC6 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
COPS9Q8WXC6 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
COPS9Q8WXC6 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
COPS9Q8WXC6 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
COPS9Q8WXC6 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
COPS9Q8WXC6 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC12.23□□□□□ -0.45
COPS9Q8WXC6 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC12.23□□□□□ -0.45
COPS9Q8WXC6 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
COPS9Q8WXC6 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
COPS9Q8WXC6 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
COPS9Q8WXC6 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
COPS9Q8WXC6 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
COPS9Q8WXC6 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
COPS9Q8WXC6 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
COPS9Q8WXC6 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
COPS9Q8WXC6 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
COPS9Q8WXC6 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC12.23□□□□□ -0.45
COPS9Q8WXC6 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC12.23□□□□□ -0.45
COPS9Q8WXC6 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC12.23□□□□□ -0.45
COPS9Q8WXC6 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
COPS9Q8WXC6 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
COPS9Q8WXC6 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC12.23□□□□□ -0.45
COPS9Q8WXC6 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
COPS9Q8WXC6 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
COPS9Q8WXC6 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC12.22□□□□□ -0.45
COPS9Q8WXC6 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
COPS9Q8WXC6 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
COPS9Q8WXC6 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
COPS9Q8WXC6 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
COPS9Q8WXC6 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC12.22□□□□□ -0.45
COPS9Q8WXC6 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
COPS9Q8WXC6 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
COPS9Q8WXC6 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC12.22□□□□□ -0.45
COPS9Q8WXC6 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
COPS9Q8WXC6 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
COPS9Q8WXC6 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC12.22□□□□□ -0.45
COPS9Q8WXC6 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
COPS9Q8WXC6 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
COPS9Q8WXC6 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
COPS9Q8WXC6 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
COPS9Q8WXC6 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
COPS9Q8WXC6 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms