Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRAF3IP1Q8TDR0 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRAF3IP1Q8TDR0 AC008764.6-201ENST00000595909 2069 ntBASIC18.89■□□□□ 0.61
TRAF3IP1Q8TDR0 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.89■□□□□ 0.61
TRAF3IP1Q8TDR0 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TRAF3IP1Q8TDR0 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
TRAF3IP1Q8TDR0 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRAF3IP1Q8TDR0 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRAF3IP1Q8TDR0 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRAF3IP1Q8TDR0 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRAF3IP1Q8TDR0 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
TRAF3IP1Q8TDR0 LINC01126-201ENST00000623515 1646 ntBASIC18.89■□□□□ 0.61
TRAF3IP1Q8TDR0 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAF3IP1Q8TDR0 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAF3IP1Q8TDR0 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRAF3IP1Q8TDR0 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAF3IP1Q8TDR0 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAF3IP1Q8TDR0 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAF3IP1Q8TDR0 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAF3IP1Q8TDR0 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAF3IP1Q8TDR0 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.88■□□□□ 0.61
TRAF3IP1Q8TDR0 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAF3IP1Q8TDR0 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAF3IP1Q8TDR0 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRAF3IP1Q8TDR0 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.88■□□□□ 0.61
TRAF3IP1Q8TDR0 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.88■□□□□ 0.61
TRAF3IP1Q8TDR0 AC145285.6-201ENST00000604632 637 ntBASIC18.88■□□□□ 0.61
TRAF3IP1Q8TDR0 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.88■□□□□ 0.61
TRAF3IP1Q8TDR0 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRAF3IP1Q8TDR0 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.88■□□□□ 0.61
TRAF3IP1Q8TDR0 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAF3IP1Q8TDR0 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAF3IP1Q8TDR0 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAF3IP1Q8TDR0 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAF3IP1Q8TDR0 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAF3IP1Q8TDR0 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAF3IP1Q8TDR0 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAF3IP1Q8TDR0 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRAF3IP1Q8TDR0 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.88■□□□□ 0.61
TRAF3IP1Q8TDR0 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.88■□□□□ 0.61
TRAF3IP1Q8TDR0 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAF3IP1Q8TDR0 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAF3IP1Q8TDR0 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
TRAF3IP1Q8TDR0 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAF3IP1Q8TDR0 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAF3IP1Q8TDR0 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAF3IP1Q8TDR0 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
TRAF3IP1Q8TDR0 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.87■□□□□ 0.61
TRAF3IP1Q8TDR0 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAF3IP1Q8TDR0 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAF3IP1Q8TDR0 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAF3IP1Q8TDR0 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.87■□□□□ 0.61
TRAF3IP1Q8TDR0 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.87■□□□□ 0.61
TRAF3IP1Q8TDR0 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.87■□□□□ 0.61
TRAF3IP1Q8TDR0 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.87■□□□□ 0.61
TRAF3IP1Q8TDR0 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.87■□□□□ 0.61
TRAF3IP1Q8TDR0 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TRAF3IP1Q8TDR0 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAF3IP1Q8TDR0 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAF3IP1Q8TDR0 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAF3IP1Q8TDR0 LETM1P2-201ENST00000597330 2178 ntBASIC18.86■□□□□ 0.61
TRAF3IP1Q8TDR0 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRAF3IP1Q8TDR0 CROCCP1-201ENST00000426910 5675 ntBASIC18.86■□□□□ 0.61
TRAF3IP1Q8TDR0 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAF3IP1Q8TDR0 AL024508.2-201ENST00000607749 1894 ntBASIC18.86■□□□□ 0.61
TRAF3IP1Q8TDR0 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRAF3IP1Q8TDR0 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.86■□□□□ 0.61
TRAF3IP1Q8TDR0 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAF3IP1Q8TDR0 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TRAF3IP1Q8TDR0 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.86■□□□□ 0.61
TRAF3IP1Q8TDR0 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.86■□□□□ 0.61
TRAF3IP1Q8TDR0 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.86■□□□□ 0.61
TRAF3IP1Q8TDR0 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.86■□□□□ 0.61
TRAF3IP1Q8TDR0 LIN28AP1-201ENST00000429574 405 ntBASIC18.86■□□□□ 0.61
TRAF3IP1Q8TDR0 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.86■□□□□ 0.61
TRAF3IP1Q8TDR0 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRAF3IP1Q8TDR0 MIR3917-201ENST00000580971 93 ntBASIC18.86■□□□□ 0.61
TRAF3IP1Q8TDR0 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.86■□□□□ 0.61
TRAF3IP1Q8TDR0 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRAF3IP1Q8TDR0 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
TRAF3IP1Q8TDR0 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAF3IP1Q8TDR0 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAF3IP1Q8TDR0 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAF3IP1Q8TDR0 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRAF3IP1Q8TDR0 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAF3IP1Q8TDR0 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRAF3IP1Q8TDR0 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TRAF3IP1Q8TDR0 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAF3IP1Q8TDR0 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAF3IP1Q8TDR0 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAF3IP1Q8TDR0 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAF3IP1Q8TDR0 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.85■□□□□ 0.61
TRAF3IP1Q8TDR0 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TRAF3IP1Q8TDR0 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAF3IP1Q8TDR0 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAF3IP1Q8TDR0 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TRAF3IP1Q8TDR0 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
TRAF3IP1Q8TDR0 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRAF3IP1Q8TDR0 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.85■□□□□ 0.61
TRAF3IP1Q8TDR0 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms