Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CCHCR1Q8TD31 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCHCR1Q8TD31 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCHCR1Q8TD31 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CCHCR1Q8TD31 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCHCR1Q8TD31 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCHCR1Q8TD31 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCHCR1Q8TD31 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.88■□□□□ 0.61
CCHCR1Q8TD31 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCHCR1Q8TD31 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCHCR1Q8TD31 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCHCR1Q8TD31 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCHCR1Q8TD31 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.87■□□□□ 0.61
CCHCR1Q8TD31 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCHCR1Q8TD31 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCHCR1Q8TD31 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCHCR1Q8TD31 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.87■□□□□ 0.61
CCHCR1Q8TD31 MIR149-201ENST00000384879 89 ntBASIC18.87■□□□□ 0.61
CCHCR1Q8TD31 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.87■□□□□ 0.61
CCHCR1Q8TD31 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCHCR1Q8TD31 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCHCR1Q8TD31 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.87■□□□□ 0.61
CCHCR1Q8TD31 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCHCR1Q8TD31 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.87■□□□□ 0.61
CCHCR1Q8TD31 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.87■□□□□ 0.61
CCHCR1Q8TD31 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
CCHCR1Q8TD31 AP003041.3-201ENST00000527151 707 ntBASIC18.87■□□□□ 0.61
CCHCR1Q8TD31 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CCHCR1Q8TD31 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.87■□□□□ 0.61
CCHCR1Q8TD31 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.87■□□□□ 0.61
CCHCR1Q8TD31 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.87■□□□□ 0.61
CCHCR1Q8TD31 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
CCHCR1Q8TD31 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCHCR1Q8TD31 AC009102.3-201ENST00000623118 1491 ntBASIC18.87■□□□□ 0.61
CCHCR1Q8TD31 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.87■□□□□ 0.61
CCHCR1Q8TD31 AC097493.4-201ENST00000641197 219 ntBASIC18.87■□□□□ 0.61
CCHCR1Q8TD31 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCHCR1Q8TD31 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCHCR1Q8TD31 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCHCR1Q8TD31 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCHCR1Q8TD31 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCHCR1Q8TD31 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.86■□□□□ 0.61
CCHCR1Q8TD31 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCHCR1Q8TD31 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCHCR1Q8TD31 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.86■□□□□ 0.61
CCHCR1Q8TD31 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCHCR1Q8TD31 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.86■□□□□ 0.61
CCHCR1Q8TD31 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.86■□□□□ 0.61
CCHCR1Q8TD31 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCHCR1Q8TD31 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CCHCR1Q8TD31 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.86■□□□□ 0.61
CCHCR1Q8TD31 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCHCR1Q8TD31 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCHCR1Q8TD31 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCHCR1Q8TD31 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.86■□□□□ 0.61
CCHCR1Q8TD31 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.86■□□□□ 0.61
CCHCR1Q8TD31 ECEL1P2-202ENST00000465689 757 ntBASIC18.86■□□□□ 0.61
CCHCR1Q8TD31 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.86■□□□□ 0.61
CCHCR1Q8TD31 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCHCR1Q8TD31 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCHCR1Q8TD31 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCHCR1Q8TD31 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCHCR1Q8TD31 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCHCR1Q8TD31 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CCHCR1Q8TD31 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CCHCR1Q8TD31 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCHCR1Q8TD31 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCHCR1Q8TD31 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.85■□□□□ 0.61
CCHCR1Q8TD31 AL163051.1-201ENST00000569214 1512 ntBASIC18.85■□□□□ 0.61
CCHCR1Q8TD31 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.85■□□□□ 0.61
CCHCR1Q8TD31 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCHCR1Q8TD31 KRT8P7-201ENST00000533003 1432 ntBASIC18.85■□□□□ 0.61
CCHCR1Q8TD31 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCHCR1Q8TD31 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCHCR1Q8TD31 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCHCR1Q8TD31 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.85■□□□□ 0.61
CCHCR1Q8TD31 AL512604.3-201ENST00000569583 964 ntBASIC18.85■□□□□ 0.61
CCHCR1Q8TD31 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.85■□□□□ 0.61
CCHCR1Q8TD31 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CCHCR1Q8TD31 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCHCR1Q8TD31 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCHCR1Q8TD31 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCHCR1Q8TD31 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCHCR1Q8TD31 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCHCR1Q8TD31 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCHCR1Q8TD31 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.85■□□□□ 0.61
CCHCR1Q8TD31 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CCHCR1Q8TD31 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCHCR1Q8TD31 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCHCR1Q8TD31 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.84■□□□□ 0.61
CCHCR1Q8TD31 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCHCR1Q8TD31 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
CCHCR1Q8TD31 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.84■□□□□ 0.61
CCHCR1Q8TD31 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCHCR1Q8TD31 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.84■□□□□ 0.61
CCHCR1Q8TD31 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.84■□□□□ 0.61
CCHCR1Q8TD31 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCHCR1Q8TD31 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CCHCR1Q8TD31 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCHCR1Q8TD31 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms