Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.98■□□□□ 0.63
SHKBP1Q8TBC3 AL591684.3-201ENST00000605187 298 ntBASIC18.98■□□□□ 0.63
SHKBP1Q8TBC3 TP73-AS1-207ENST00000624167 988 ntBASIC18.98■□□□□ 0.63
SHKBP1Q8TBC3 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.98■□□□□ 0.63
SHKBP1Q8TBC3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHKBP1Q8TBC3 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.98■□□□□ 0.63
SHKBP1Q8TBC3 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.98■□□□□ 0.63
SHKBP1Q8TBC3 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHKBP1Q8TBC3 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SHKBP1Q8TBC3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SHKBP1Q8TBC3 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.97■□□□□ 0.63
SHKBP1Q8TBC3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SHKBP1Q8TBC3 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.97■□□□□ 0.63
SHKBP1Q8TBC3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
SHKBP1Q8TBC3 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
SHKBP1Q8TBC3 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.97■□□□□ 0.63
SHKBP1Q8TBC3 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.97■□□□□ 0.63
SHKBP1Q8TBC3 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.97■□□□□ 0.63
SHKBP1Q8TBC3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHKBP1Q8TBC3 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SHKBP1Q8TBC3 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SHKBP1Q8TBC3 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHKBP1Q8TBC3 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHKBP1Q8TBC3 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHKBP1Q8TBC3 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.97■□□□□ 0.63
SHKBP1Q8TBC3 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHKBP1Q8TBC3 MIR5100-201ENST00000579544 119 ntBASIC18.97■□□□□ 0.63
SHKBP1Q8TBC3 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.97■□□□□ 0.63
SHKBP1Q8TBC3 AC005336.2-201ENST00000593183 939 ntBASIC18.97■□□□□ 0.63
SHKBP1Q8TBC3 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.97■□□□□ 0.63
SHKBP1Q8TBC3 AC114341.1-201ENST00000618070 349 ntBASIC18.97■□□□□ 0.63
SHKBP1Q8TBC3 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHKBP1Q8TBC3 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.97■□□□□ 0.63
SHKBP1Q8TBC3 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
SHKBP1Q8TBC3 HLA-A-201ENST00000376802 1334 ntBASIC18.97■□□□□ 0.63
SHKBP1Q8TBC3 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
SHKBP1Q8TBC3 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHKBP1Q8TBC3 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.96■□□□□ 0.63
SHKBP1Q8TBC3 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHKBP1Q8TBC3 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHKBP1Q8TBC3 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHKBP1Q8TBC3 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHKBP1Q8TBC3 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
SHKBP1Q8TBC3 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SHKBP1Q8TBC3 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHKBP1Q8TBC3 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHKBP1Q8TBC3 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHKBP1Q8TBC3 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHKBP1Q8TBC3 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHKBP1Q8TBC3 AC068472.1-201ENST00000474589 881 ntBASIC18.96■□□□□ 0.63
SHKBP1Q8TBC3 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
SHKBP1Q8TBC3 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
SHKBP1Q8TBC3 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.96■□□□□ 0.63
SHKBP1Q8TBC3 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SHKBP1Q8TBC3 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SHKBP1Q8TBC3 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SHKBP1Q8TBC3 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHKBP1Q8TBC3 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.96■□□□□ 0.63
SHKBP1Q8TBC3 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHKBP1Q8TBC3 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SHKBP1Q8TBC3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHKBP1Q8TBC3 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHKBP1Q8TBC3 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHKBP1Q8TBC3 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHKBP1Q8TBC3 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHKBP1Q8TBC3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHKBP1Q8TBC3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.96■□□□□ 0.63
SHKBP1Q8TBC3 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.96■□□□□ 0.63
SHKBP1Q8TBC3 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SHKBP1Q8TBC3 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHKBP1Q8TBC3 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SHKBP1Q8TBC3 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.96■□□□□ 0.63
SHKBP1Q8TBC3 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHKBP1Q8TBC3 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SHKBP1Q8TBC3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SHKBP1Q8TBC3 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.95■□□□□ 0.62
SHKBP1Q8TBC3 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHKBP1Q8TBC3 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHKBP1Q8TBC3 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.95■□□□□ 0.62
SHKBP1Q8TBC3 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.95■□□□□ 0.62
SHKBP1Q8TBC3 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
SHKBP1Q8TBC3 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.95■□□□□ 0.62
SHKBP1Q8TBC3 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.95■□□□□ 0.62
SHKBP1Q8TBC3 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHKBP1Q8TBC3 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.95■□□□□ 0.62
SHKBP1Q8TBC3 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
SHKBP1Q8TBC3 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SHKBP1Q8TBC3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHKBP1Q8TBC3 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SHKBP1Q8TBC3 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SHKBP1Q8TBC3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
SHKBP1Q8TBC3 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.94■□□□□ 0.62
SHKBP1Q8TBC3 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SHKBP1Q8TBC3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.94■□□□□ 0.62
SHKBP1Q8TBC3 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHKBP1Q8TBC3 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHKBP1Q8TBC3 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHKBP1Q8TBC3 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.94■□□□□ 0.62
SHKBP1Q8TBC3 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHKBP1Q8TBC3 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms