Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TTC16Q8NEE8 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.01■□□□□ 0.63
TTC16Q8NEE8 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TTC16Q8NEE8 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TTC16Q8NEE8 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TTC16Q8NEE8 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19■□□□□ 0.63
TTC16Q8NEE8 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TTC16Q8NEE8 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TTC16Q8NEE8 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TTC16Q8NEE8 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
TTC16Q8NEE8 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19■□□□□ 0.63
TTC16Q8NEE8 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TTC16Q8NEE8 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19■□□□□ 0.63
TTC16Q8NEE8 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TTC16Q8NEE8 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19■□□□□ 0.63
TTC16Q8NEE8 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19■□□□□ 0.63
TTC16Q8NEE8 EMBP1-201ENST00000458200 901 ntBASIC19■□□□□ 0.63
TTC16Q8NEE8 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19■□□□□ 0.63
TTC16Q8NEE8 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19■□□□□ 0.63
TTC16Q8NEE8 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19■□□□□ 0.63
TTC16Q8NEE8 Z69720.1-201ENST00000601483 472 ntBASIC19■□□□□ 0.63
TTC16Q8NEE8 AL121772.3-201ENST00000610840 674 ntBASIC19■□□□□ 0.63
TTC16Q8NEE8 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19■□□□□ 0.63
TTC16Q8NEE8 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19■□□□□ 0.63
TTC16Q8NEE8 AC233702.3-201ENST00000578656 1387 ntBASIC19■□□□□ 0.63
TTC16Q8NEE8 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19■□□□□ 0.63
TTC16Q8NEE8 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TTC16Q8NEE8 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TTC16Q8NEE8 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19■□□□□ 0.63
TTC16Q8NEE8 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TTC16Q8NEE8 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
TTC16Q8NEE8 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TTC16Q8NEE8 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TTC16Q8NEE8 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
TTC16Q8NEE8 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19■□□□□ 0.63
TTC16Q8NEE8 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TTC16Q8NEE8 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TTC16Q8NEE8 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.99■□□□□ 0.63
TTC16Q8NEE8 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
TTC16Q8NEE8 AC009102.3-201ENST00000623118 1491 ntBASIC18.99■□□□□ 0.63
TTC16Q8NEE8 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TTC16Q8NEE8 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TTC16Q8NEE8 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TTC16Q8NEE8 AP000593.1-201ENST00000393668 712 ntBASIC18.99■□□□□ 0.63
TTC16Q8NEE8 NUS1P2-201ENST00000417358 873 ntBASIC18.99■□□□□ 0.63
TTC16Q8NEE8 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.99■□□□□ 0.63
TTC16Q8NEE8 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.99■□□□□ 0.63
TTC16Q8NEE8 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.99■□□□□ 0.63
TTC16Q8NEE8 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TTC16Q8NEE8 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.99■□□□□ 0.63
TTC16Q8NEE8 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TTC16Q8NEE8 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
TTC16Q8NEE8 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.99■□□□□ 0.63
TTC16Q8NEE8 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TTC16Q8NEE8 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TTC16Q8NEE8 NFIC-211ENST00000641145 8399 ntBASIC18.99■□□□□ 0.63
TTC16Q8NEE8 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TTC16Q8NEE8 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TTC16Q8NEE8 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TTC16Q8NEE8 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TTC16Q8NEE8 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TTC16Q8NEE8 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.99■□□□□ 0.63
TTC16Q8NEE8 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TTC16Q8NEE8 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.99■□□□□ 0.63
TTC16Q8NEE8 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TTC16Q8NEE8 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TTC16Q8NEE8 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TTC16Q8NEE8 AP000974.1-201ENST00000623909 2387 ntBASIC18.98■□□□□ 0.63
TTC16Q8NEE8 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TTC16Q8NEE8 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TTC16Q8NEE8 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TTC16Q8NEE8 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TTC16Q8NEE8 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.98■□□□□ 0.63
TTC16Q8NEE8 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TTC16Q8NEE8 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
TTC16Q8NEE8 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TTC16Q8NEE8 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
TTC16Q8NEE8 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
TTC16Q8NEE8 NUS1P1-201ENST00000446295 882 ntBASIC18.98■□□□□ 0.63
TTC16Q8NEE8 MINOS1P3-201ENST00000457048 203 ntBASIC18.98■□□□□ 0.63
TTC16Q8NEE8 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.98■□□□□ 0.63
TTC16Q8NEE8 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.98■□□□□ 0.63
TTC16Q8NEE8 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TTC16Q8NEE8 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.98■□□□□ 0.63
TTC16Q8NEE8 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
TTC16Q8NEE8 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TTC16Q8NEE8 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TTC16Q8NEE8 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TTC16Q8NEE8 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TTC16Q8NEE8 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.98■□□□□ 0.63
TTC16Q8NEE8 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TTC16Q8NEE8 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TTC16Q8NEE8 MYLKP1-201ENST00000509077 1580 ntBASIC18.98■□□□□ 0.63
TTC16Q8NEE8 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TTC16Q8NEE8 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.97■□□□□ 0.63
TTC16Q8NEE8 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TTC16Q8NEE8 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TTC16Q8NEE8 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TTC16Q8NEE8 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TTC16Q8NEE8 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms